Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 1.9e-128 462.6 252 100.0
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 5.9e-61 238.4 260 61.2
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.5e-59 233.0 258 61.2
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 8.0e-58 228.0 261 60.5
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 5.7e-56 221.9 258 58.5
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.2e-55 219.9 260 59.2
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 2.8e-47 193.0 270 53.3
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 6.3e-47 191.8 270 52.2
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 3.5e-45 186.0 269 48.7
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 3.2e-43 179.5 240 53.3
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 2.7e-42 176.4 262 51.5
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-41 174.1 286 45.1
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 4.0e-41 172.6 268 50.7
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 3.4e-40 169.5 242 52.9
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 8.3e-39 164.9 281 47.3
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.1e-38 164.5 262 50.0
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 3.1e-38 162.9 285 44.2
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 2.0e-37 160.2 269 46.8
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 2.3e-36 156.8 263 46.0
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 2.5e-35 153.3 301 45.2
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.3e-35 152.9 285 42.8
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 3.3e-35 152.9 262 45.4
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 2.8e-34 149.8 258 45.3
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 2.8e-34 149.8 193 53.9
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 3.6e-34 149.4 223 48.4
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.0e-33 147.9 264 45.1
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.4e-33 147.5 264 45.5
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 1.8e-33 147.1 268 42.9
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 3.0e-33 146.4 239 52.3
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 6.8e-33 145.2 272 42.6
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 8.9e-33 144.8 267 44.9
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.3e-31 141.0 261 43.7
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 2.2e-31 140.2 263 42.6
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 4.9e-31 139.0 256 44.9
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.3e-31 138.3 250 43.6
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.1e-30 137.9 224 44.6
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.2e-29 134.4 220 43.6
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 1.3e-28 131.0 227 45.4
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 1.3e-28 131.0 235 44.3
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 1.3e-28 131.0 245 40.4
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.3e-28 131.0 240 44.2
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 5.0e-28 129.0 250 42.4
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.0e-28 129.0 250 42.4
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 5.6e-27 125.6 260 43.1
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.1e-26 123.6 257 38.9
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.8e-25 120.6 159 48.4
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 8.9e-25 118.2 262 41.2
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 2.6e-24 116.7 241 41.1
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 4.4e-24 115.9 231 40.3
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 4.9e-23 112.5 229 39.7
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 2.4e-22 110.2 231 40.3
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 4.1e-22 109.4 184 48.9
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 5.4e-22 109.0 222 41.0
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 7.0e-22 108.6 270 38.1
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 2.7e-21 106.7 266 39.1
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.9e-20 102.8 247 38.5
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 5.0e-20 102.4 257 36.2
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 1.5e-19 100.9 237 38.4
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 2.5e-19 100.1 245 37.6
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 2.5e-19 100.1 248 37.9
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 5.6e-19 99.0 184 39.1
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 5.6e-19 99.0 186 41.4
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 1.2e-18 97.8 260 35.8
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 3.6e-18 96.3 242 40.1
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 4.7e-18 95.9 233 37.8
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 8.0e-18 95.1 244 36.5
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 1.8e-17 94.0 188 43.6
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 5.2e-17 92.4 183 41.5
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.5e-16 90.9 136 46.3
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 4.4e-16 89.4 245 36.3
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 9.8e-16 88.2 261 36.4
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.2e-15 87.0 234 36.3
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 4.9e-15 85.9 121 49.6
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 1.4e-14 84.3 263 33.1
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.9e-14 84.0 258 34.9
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 3.5e-13 79.7 205 36.1
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 1.5e-11 74.3 235 32.3
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 5.2e-09 65.9 55 60.0
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 8.9e-09 65.1 270 34.4
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 1.2e-08 64.7 65 61.5
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.0e-08 63.9 233 33.0
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 4.4e-08 62.8 117 35.9
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 7.6e-08 62.0 48 64.6
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 9.9e-08 61.6 48 62.5
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 9.9e-08 61.6 132 36.4
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 9.9e-08 61.6 159 33.3
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 1.3e-07 61.2 48 64.6
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 1.3e-07 61.2 63 58.7
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 1.7e-07 60.8 57 57.9
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 1.7e-07 60.8 57 57.9
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 1.7e-07 60.8 57 57.9
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 2.9e-07 60.1 48 62.5
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.9e-07 60.1 175 32.6
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 4.9e-07 59.3 186 35.5
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 6.4e-07 58.9 47 61.7
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 6.4e-07 58.9 132 34.1
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 8.3e-07 58.5 173 31.8
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 1.1e-06 58.2 48 60.4
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 1.4e-06 57.8 117 33.3
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.4e-06 57.8 106 35.8
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.4e-06 57.8 106 35.8
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.4e-06 57.8 106 35.8
HanXRQChr13g0387161 Helianthus annuus HOM05D007731 ORTHO05D008483 1.9e-06 57.4 142 37.3
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 2.4e-06 57.0 121 33.9
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 2.4e-06 57.0 121 33.9
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 2.4e-06 57.0 153 32.7
Aa31LG7G4510 Aethionema arabicum HOM05D009961 ORTHO05D008483 3.2e-06 56.6 62 56.5
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.2e-06 56.6 134 36.6
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 4.1e-06 56.2 120 36.7
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 4.1e-06 56.2 134 34.3
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 5.4e-06 55.8 235 31.9
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 5.4e-06 55.8 132 31.8
Actinidia32376 Actinidia chinensis HOM05D001921 ORTHO05D001784 7.1e-06 55.5 113 37.2
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 7.1e-06 55.5 119 34.5
Prupe.1G145900 Prunus persica HOM05D001921 ORTHO05D001784 7.1e-06 55.5 106 37.7
BcaC07g39017 Brassica carinata HOM05D009961 ORTHO05D008483 9.2e-06 55.1 49 57.1
C08p19900 Brassica napus HOM05D009961 ORTHO05D008483 9.2e-06 55.1 49 57.1
BolC8t49628H Brassica oleracea HOM05D009961 ORTHO05D008483 9.2e-06 55.1 49 57.1


User provided reference genes

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