Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.7e-141 506.1 284 100.0
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 3.1e-42 176.4 285 50.5
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.6e-41 173.3 285 50.9
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 4.9e-40 169.1 270 50.0
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.1e-39 167.9 253 50.6
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.4e-39 167.5 285 48.4
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.9e-39 167.2 284 49.6
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.2e-39 166.4 284 50.0
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 7.9e-38 161.8 246 48.4
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.8e-37 160.6 266 46.2
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.3e-37 160.2 247 49.4
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 3.0e-37 159.8 253 49.4
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 5.1e-37 159.1 246 50.8
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.5e-36 157.5 268 48.9
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 4.3e-36 156.0 272 47.1
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.6e-35 154.1 249 48.2
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 2.8e-35 153.3 269 45.7
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.4e-34 151.0 269 46.5
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.8e-34 150.6 245 47.3
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.4e-34 150.2 247 47.4
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 2.4e-34 150.2 268 46.3
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 9.0e-34 148.3 268 47.0
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 4.5e-33 146.0 248 46.4
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.7e-32 144.1 245 47.8
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 2.2e-32 143.7 247 46.6
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 3.8e-32 142.9 245 45.7
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.9e-31 140.6 250 47.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 2.5e-31 140.2 247 46.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.2e-31 139.4 246 45.9
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.2e-31 138.7 250 46.4
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 7.2e-31 138.7 268 43.3
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.2e-30 137.9 250 47.2
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 1.6e-30 137.5 270 44.8
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.6e-30 136.0 250 46.0
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.6e-30 136.0 250 46.0
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.8e-29 134.0 268 42.5
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.1e-28 131.3 246 43.5
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.5e-28 130.2 246 44.3
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 3.3e-28 129.8 266 40.2
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.3e-28 129.8 273 42.9
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 9.7e-28 128.3 246 43.5
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.8e-27 126.7 269 41.6
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 8.2e-27 125.2 247 42.5
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.4e-26 123.6 245 42.9
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 2.4e-26 123.6 246 43.9
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 5.3e-26 122.5 246 42.3
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 6.9e-26 122.1 249 43.8
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 9.0e-26 121.7 183 49.2
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 9.0e-26 121.7 246 42.3
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 4.5e-25 119.4 250 42.0
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 4.5e-25 119.4 270 41.1
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 4.5e-25 119.4 249 41.8
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 5.9e-25 119.0 273 41.0
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.9e-24 116.7 246 41.9
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 2.9e-24 116.7 243 41.2
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 6.5e-24 115.5 247 42.1
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 8.5e-24 115.2 244 41.4
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.9e-23 114.0 262 41.2
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.5e-23 113.6 249 41.4
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 4.2e-23 112.8 258 41.5
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 5.5e-23 112.5 283 39.6
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 9.4e-23 111.7 269 39.4
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 3.6e-22 109.8 254 39.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 6.1e-22 109.0 245 40.8
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 7.9e-22 108.6 268 39.9
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.0e-21 108.2 258 39.1
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.4e-21 107.8 266 39.5
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.3e-21 107.1 270 39.6
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 3.9e-21 106.3 265 38.5
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.1e-20 104.8 243 39.5
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.1e-20 104.8 243 39.5
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 3.3e-20 103.2 266 39.1
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 5.7e-20 102.4 218 43.1
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 5.7e-20 102.4 218 43.1
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 2.2e-19 100.5 263 38.4
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 3.7e-19 99.8 249 37.8
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 4.8e-19 99.4 244 38.1
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 6.3e-19 99.0 254 39.0
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.4e-18 97.8 247 43.3
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.4e-18 97.1 264 37.5
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 4.1e-18 96.3 246 39.0
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.1e-18 96.3 263 35.4
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 6.9e-18 95.5 267 38.2
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 9.1e-18 95.1 247 39.3
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 3.4e-17 93.2 251 37.8
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 3.4e-17 93.2 243 38.3
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.0e-16 91.7 267 36.3
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.3e-16 91.3 267 36.0
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.3e-16 91.3 239 36.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.2e-16 90.5 266 36.1
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.2e-16 90.5 272 36.8
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 3.8e-16 89.7 202 41.6
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.8e-16 89.7 247 37.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 5.0e-16 89.4 247 38.1
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 8.5e-16 88.6 268 35.1
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.1e-15 88.2 146 45.9
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.4e-15 87.8 248 38.7
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.6e-14 84.3 250 33.2
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 2.7e-14 83.6 253 36.4
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 7.9e-14 82.0 209 36.4
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.8e-13 80.9 250 35.2
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-13 80.9 267 34.1
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 1.8e-13 80.9 245 35.1
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 2.3e-13 80.5 269 33.8
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.3e-13 80.5 270 34.4
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 2.3e-13 80.5 269 33.8
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.9e-13 79.7 267 33.7
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 6.7e-13 79.0 234 33.8
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.5e-12 77.8 234 33.8
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 5.7e-12 75.9 106 49.1
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 1.7e-11 74.3 127 44.1
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.8e-11 73.6 154 41.6
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 6.3e-11 72.4 272 32.4
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 8.2e-11 72.0 260 33.5
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 8.2e-11 72.0 246 34.1
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 3.1e-10 70.1 184 37.0
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.3e-10 69.3 246 32.9
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 5.5e-07 59.3 140 37.1
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 3.6e-06 56.6 133 41.4
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 6.1e-06 55.8 208 31.7
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 6.1e-06 55.8 208 31.7


User provided reference genes

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