Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 1.0e-37 159.5 75 100.0
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 4.8e-27 124.0 81 77.8
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 6.3e-27 123.6 81 77.8
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 6.3e-27 123.6 81 77.8
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 6.3e-27 123.6 81 77.8
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 6.3e-27 123.6 81 77.8
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.2e-24 115.2 79 73.4
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.8e-24 114.4 81 71.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 3.8e-24 114.4 79 70.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.8e-24 114.4 79 70.9
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.8e-24 114.4 79 70.9
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 5.0e-24 114.0 81 70.4
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 5.0e-24 114.0 79 72.2
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 6.5e-24 113.6 78 70.5
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 6.5e-24 113.6 79 70.9
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.5e-24 113.2 81 70.4
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.9e-23 112.1 79 70.9
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 2.5e-23 111.7 81 70.4
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.5e-23 111.7 79 68.4
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 4.2e-23 110.9 74 73.0
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 5.5e-23 110.5 82 70.7
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 5.5e-23 110.5 79 70.9
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.2e-23 110.2 81 69.1
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 7.2e-23 110.2 79 68.4
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 7.2e-23 110.2 79 67.1
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 7.2e-23 110.2 79 68.4
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 9.4e-23 109.8 79 70.9
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.2e-22 109.4 79 67.1
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.2e-22 109.4 79 68.4
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.2e-22 109.4 81 69.1
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.6e-22 109.0 81 66.7
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.6e-22 109.0 79 68.4
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.6e-22 109.0 76 72.4
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 2.1e-22 108.6 70 77.1
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 2.7e-22 108.2 76 69.7
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.7e-22 108.2 79 68.4
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.7e-22 108.2 81 67.9
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.7e-22 108.2 79 69.6
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.7e-22 108.2 79 68.4
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 2.7e-22 108.2 79 68.4
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 3.6e-22 107.8 79 68.4
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 3.6e-22 107.8 81 65.4
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 3.6e-22 107.8 69 76.8
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.7e-22 107.5 71 76.1
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 4.7e-22 107.5 79 68.4
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 4.7e-22 107.5 81 69.1
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 6.1e-22 107.1 79 68.4
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 6.1e-22 107.1 79 68.4
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.0e-21 106.3 81 67.9
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.4e-21 105.9 81 67.9
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.4e-21 105.9 81 66.7
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.4e-21 105.9 81 65.4
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.4e-21 105.9 79 67.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.4e-21 105.9 81 66.7
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.8e-21 105.5 76 67.1
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.8e-21 105.5 79 68.4
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.3e-21 105.1 69 75.4
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.3e-21 105.1 74 68.9
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-21 104.8 79 65.8
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-21 104.8 79 65.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-21 104.8 79 65.8
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.0e-21 104.8 79 65.8
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.2e-21 104.0 75 66.7
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.2e-21 104.0 75 66.7
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.2e-21 104.0 69 75.4
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.2e-21 104.0 71 73.2
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 6.7e-21 103.6 74 67.6
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 8.8e-21 103.2 69 73.9
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.1e-20 102.8 81 65.4
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.1e-20 102.8 79 65.8
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.5e-20 102.4 81 65.4
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.5e-20 102.4 79 63.3
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.4e-20 100.9 71 73.2
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 4.4e-20 100.9 69 72.5
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 4.4e-20 100.9 75 65.3
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 4.4e-20 100.9 81 63.0
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 4.4e-20 100.9 81 63.0
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 7.4e-20 100.1 79 63.3
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 7.4e-20 100.1 73 65.8
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.3e-19 99.4 69 71.0
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 1.7e-19 99.0 69 71.0
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.7e-19 99.0 68 72.1
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 3.7e-19 97.8 73 68.5
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 5.3e-18 94.0 73 64.4
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.6e-17 92.4 79 57.0
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 2.9e-16 88.2 70 67.1
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 2.9e-16 88.2 70 67.1
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 7.2e-15 83.6 70 64.3
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 2.0e-12 75.5 70 60.0
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 3.4e-12 74.7 67 55.2
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.8e-11 71.6 75 46.7
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.8e-11 71.6 51 70.6
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 8.3e-11 70.1 79 55.7
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 3.1e-10 68.2 69 58.0
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 4.1e-10 67.8 67 49.3
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 9.1e-10 66.6 46 71.7
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 1.7e-08 62.4 39 71.8
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-07 59.3 62 58.1
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-07 59.3 62 58.1
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.5e-07 59.3 28 92.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.2e-06 56.2 63 57.1
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.2e-06 56.2 63 57.1
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.2e-06 56.2 63 57.1
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.2e-06 56.2 63 57.1


User provided reference genes

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