Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 5.3e-90 334.3 169 100.0
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.6e-57 226.5 157 75.2
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.5e-55 219.9 158 70.9
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 3.2e-55 218.8 151 76.2
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 8.8e-53 210.7 152 72.4
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.7e-52 207.2 151 71.5
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 1.3e-51 206.8 159 70.4
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 2.4e-50 202.6 151 69.5
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 3.1e-50 202.2 155 69.0
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 9.1e-50 200.7 154 64.9
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 2.7e-49 199.1 153 69.3
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 7.7e-49 197.6 158 66.5
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 5.0e-48 194.9 157 66.2
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 6.5e-48 194.5 149 69.8
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.1e-47 193.7 149 62.4
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.1e-47 193.7 146 67.8
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 2.1e-46 189.5 156 64.7
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 3.6e-46 188.7 161 63.4
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.6e-46 188.7 152 65.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 8.0e-46 187.6 159 64.2
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 8.0e-46 187.6 162 64.8
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 8.0e-46 187.6 147 65.3
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.8e-45 186.4 162 61.7
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 4.0e-45 185.3 157 61.8
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 6.8e-45 184.5 154 65.6
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 6.8e-45 184.5 157 63.7
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 8.8e-45 184.1 151 60.9
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.5e-44 183.3 155 62.6
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 4.4e-44 181.8 149 63.8
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 5.7e-44 181.4 155 64.5
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 5.7e-44 181.4 155 64.5
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 7.5e-44 181.0 123 72.4
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 7.5e-44 181.0 123 72.4
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.3e-43 180.3 153 60.1
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 2.2e-43 179.5 162 60.5
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 2.2e-43 179.5 155 64.5
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 2.8e-43 179.1 161 61.5
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 2.8e-43 179.1 153 59.5
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.8e-43 179.1 122 70.5
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 3.7e-43 178.7 155 61.3
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 8.3e-43 177.6 154 62.3
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 8.3e-43 177.6 149 65.1
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.4e-42 176.8 152 61.2
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.8e-42 176.4 152 61.8
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 4.1e-42 175.3 158 62.7
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 9.1e-42 174.1 153 60.8
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.2e-41 173.7 157 58.0
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 2.7e-41 172.6 122 66.4
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.0e-40 170.6 153 56.9
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.3e-40 170.2 121 67.8
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.7e-40 169.9 103 80.6
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.7e-40 169.9 153 58.8
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.3e-40 169.5 139 59.7
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.9e-40 169.1 160 58.1
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 2.9e-40 169.1 148 59.5
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 2.9e-40 169.1 140 63.6
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 5.0e-40 168.3 152 57.9
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 6.6e-40 167.9 163 57.7
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.1e-39 167.2 147 57.1
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.1e-39 167.2 152 61.8
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.5e-39 166.0 122 68.0
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.3e-39 165.6 122 67.2
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 3.3e-39 165.6 146 57.5
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 3.3e-39 165.6 146 57.5
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 5.5e-39 164.9 151 55.0
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 7.2e-39 164.5 134 64.2
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.8e-38 162.5 132 61.4
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.8e-38 162.5 122 65.6
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 2.8e-38 162.5 151 57.0
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.6e-38 162.2 138 57.2
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 3.6e-38 162.2 130 65.4
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.7e-38 161.8 179 51.4
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 6.1e-38 161.4 121 66.9
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 8.0e-38 161.0 163 55.8
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 8.0e-38 161.0 136 58.8
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.0e-37 160.6 150 58.0
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 2.3e-37 159.5 126 64.3
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 5.2e-37 158.3 130 64.6
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 5.2e-37 158.3 130 64.6
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 5.2e-37 158.3 131 62.6
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 1.2e-36 157.1 130 63.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 1.2e-36 157.1 130 63.8
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.5e-36 156.8 140 57.9
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 4.4e-36 155.2 131 61.1
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 2.2e-35 152.9 149 55.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 3.7e-35 152.1 150 56.7
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 6.3e-35 151.4 152 53.3
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.1e-34 148.7 126 57.9
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 9.2e-34 147.5 151 51.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 2.7e-33 146.0 148 52.0
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 5.9e-33 144.8 121 58.7
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 7.8e-33 144.4 126 58.7
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 3.3e-31 139.0 100 69.0
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 2.1e-30 136.3 104 62.5
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 2.1e-30 136.3 162 47.5
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 4.0e-29 132.1 106 65.1
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 5.2e-29 131.7 87 69.0
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.0e-28 129.8 100 59.0
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 4.4e-28 128.6 125 53.6
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 9.8e-28 127.5 108 58.3
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.3e-27 127.1 124 54.8
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 7.0e-26 121.3 101 57.4
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-22 110.5 126 51.6
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.7e-19 100.1 72 63.9
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 4.9e-19 98.6 90 61.1
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 3.5e-17 92.4 78 50.0
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 1.3e-11 73.9 59 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 6.4e-11 71.6 87 43.7
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 3.5e-09 65.9 101 36.6
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 2.3e-08 63.2 92 35.9
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.1e-07 60.8 114 28.9


User provided reference genes

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