Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 7.4e-69 264.2 185 100.0
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 8.8e-30 134.4 150 60.0
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 1.1e-27 127.5 157 53.5
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 7.0e-27 124.8 151 53.0
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 3.5e-26 122.5 151 51.7
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 2.2e-25 119.8 144 56.2
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 5.2e-22 108.6 172 51.2
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 1.2e-21 107.5 162 46.3
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 3.3e-21 105.9 161 44.7
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 5.7e-21 105.1 163 42.9
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 5.7e-21 105.1 165 43.0
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 1.7e-20 103.6 148 54.7
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 3.7e-20 102.4 169 49.1
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 6.3e-20 101.7 174 51.1
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 8.2e-20 101.3 154 50.0
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 1.1e-19 100.9 179 48.6
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 1.4e-19 100.5 179 48.6
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 1.8e-19 100.1 179 45.8
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 1.8e-19 100.1 153 45.1
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 7.0e-19 98.2 166 47.6
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 1.3e-17 94.0 161 37.3
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 2.9e-17 92.8 168 47.6
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 8.5e-17 91.3 157 43.3
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 2.5e-16 89.7 156 42.3
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 2.5e-16 89.7 152 46.1
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 2.1e-15 86.7 160 42.5
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 2.1e-15 86.7 148 42.6
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 2.1e-15 86.7 152 44.7
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 2.7e-15 86.3 162 40.7
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 3.6e-15 85.9 161 41.0
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 4.7e-15 85.5 148 50.0
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 4.7e-15 85.5 177 40.7
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 8.0e-15 84.7 148 42.6
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 8.0e-15 84.7 148 42.6
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 8.0e-15 84.7 156 46.2
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 1.8e-14 83.6 162 41.4
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 2.3e-14 83.2 178 37.1
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 2.3e-14 83.2 152 41.4
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 2.3e-14 83.2 149 42.3
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 3.0e-14 82.8 157 42.7
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 4.0e-14 82.4 155 42.6
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 6.8e-14 81.6 148 42.6
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 6.8e-14 81.6 148 42.6
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 8.8e-14 81.3 148 48.0
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 2.6e-13 79.7 161 37.9
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 2.6e-13 79.7 171 39.2
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 4.4e-13 79.0 161 43.5
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 7.5e-13 78.2 156 50.0
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 7.5e-13 78.2 153 38.6
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 2.8e-12 76.3 163 40.5
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.7e-12 75.9 141 43.3
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 3.7e-12 75.9 158 38.6
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 6.3e-12 75.1 155 37.4
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 6.3e-12 75.1 167 37.7
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 1.1e-11 74.3 155 39.4
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 1.1e-11 74.3 157 40.8
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 1.4e-11 73.9 172 38.4
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.4e-11 73.9 142 40.1
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 1.8e-11 73.6 162 38.9
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 2.4e-11 73.2 162 40.1
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 3.1e-11 72.8 158 38.6
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.1e-11 72.8 141 41.8
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 1.2e-10 70.9 134 38.1
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.2e-10 70.9 143 40.6
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 1.6e-10 70.5 160 38.1
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 4.5e-10 68.9 172 37.2
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 4.5e-10 68.9 124 39.5
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 5.9e-10 68.6 161 36.0
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 1.0e-09 67.8 153 37.3
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 1.3e-09 67.4 156 33.3
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 3.8e-09 65.9 153 37.9
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 1.1e-08 64.3 169 37.3
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.5e-08 63.2 141 35.5
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 4.2e-08 62.4 136 44.9
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 5.5e-08 62.0 164 32.9
Medtr8g022020 Medicago truncatula HOM05D007813 ORTHO05D009861 5.5e-08 62.0 171 36.3
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 5.5e-08 62.0 159 32.7
MBI12_g19602_MAGBIO Magnolia biondii HOM05D007813 ORTHO05D009861 6.1e-07 58.5 97 40.2
TPR.G29991 Trifolium pratense HOM05D007813 ORTHO05D009861 1.4e-06 57.4 172 37.2
Ca_23410_v3 Cicer arietinum L. HOM05D007813 ORTHO05D009861 1.8e-06 57.0 154 32.5
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 5.2e-06 55.5 138 38.4


User provided reference genes

Program Settings