Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 1.1e-292 1009.2 515 100.0
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 1.8e-213 746.1 513 78.6
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 4.4e-188 661.8 464 72.8
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 7.3e-183 644.4 513 66.9
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 6.2e-182 641.3 463 70.0
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 5.8e-180 634.8 536 63.2
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 1.6e-174 616.7 491 63.5
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 8.1e-174 614.4 494 64.2
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 8.9e-173 610.9 478 65.1
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 2.6e-172 609.4 458 68.6
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.3e-171 607.1 499 62.5
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 1.3e-171 607.1 504 64.1
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 1.1e-165 587.4 473 66.0
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 8.9e-165 584.3 511 58.7
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 2.6e-164 582.8 424 70.0
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 1.8e-157 560.1 476 60.5
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 1.8e-157 560.1 472 60.4
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 5.8e-156 555.1 465 61.3
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 5.8e-156 555.1 509 56.2
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 7.6e-156 554.7 471 59.4
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 9.9e-156 554.3 509 57.0
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 9.9e-156 554.3 501 56.7
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.9e-155 552.0 476 59.2
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 7.1e-154 548.1 471 58.2
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 5.1e-152 542.0 520 56.3
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 8.7e-152 541.2 523 56.0
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 3.3e-151 539.3 519 56.3
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 4.9e-147 525.4 513 58.1
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 4.9e-131 472.2 511 49.5
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 5.3e-125 452.2 317 70.0
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 4.1e-109 399.4 491 45.8
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 1.7e-107 394.0 464 46.3
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 6.3e-102 375.6 506 41.7
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 8.5e-99 365.2 405 49.1
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 1.7e-91 340.9 306 58.8
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 3.4e-87 326.6 252 64.7
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 2.9e-83 313.5 445 42.5
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.9e-69 267.7 327 53.5
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 3.1e-64 250.4 223 60.5
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.1e-61 239.2 235 55.3
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.6e-60 238.0 297 43.8
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.6e-60 238.0 297 43.8
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.3e-59 235.0 260 57.3
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 2.3e-59 234.2 266 54.5
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 8.9e-56 222.2 191 57.1
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 4.9e-54 216.5 185 60.5
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.4e-54 216.1 185 60.5
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 3.5e-52 210.3 533 31.0
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.5e-50 204.1 181 57.5
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.3e-50 202.6 181 58.0
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.8e-48 198.0 181 56.9
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.4e-47 193.4 173 57.8
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.4e-47 193.4 180 57.2
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.7e-43 181.4 166 56.6
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.7e-38 164.9 243 42.0
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.6e-36 158.3 179 49.2
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.3e-35 154.5 141 56.0
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 6.6e-35 152.9 161 49.7
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.6e-34 149.8 141 53.9
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.8e-32 144.8 124 58.1
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 2.1e-25 121.3 115 57.4
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 3.7e-25 120.6 116 56.9
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 6.5e-22 109.8 316 33.2
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.3e-19 102.1 131 42.7
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 1.5e-18 98.6 359 25.9
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 9.6e-18 95.9 77 57.1
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 1.6e-17 95.1 197 33.0
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.1e-16 92.4 77 58.4
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.4e-15 87.4 175 35.4
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 2.7e-12 77.8 122 39.3
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 1.6e-09 68.6 57 57.9
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 3.1e-08 64.3 167 35.3
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 3.4e-07 60.8 110 30.9
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 5.9e-07 60.1 139 31.7


User provided reference genes

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