Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.5e-118 429.5 215 100.0
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.0e-82 310.5 215 77.2
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 1.5e-81 306.6 216 76.9
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 4.7e-75 285.0 216 72.7
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.5e-73 280.0 216 72.7
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.8e-71 273.1 219 71.2
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 7.0e-71 271.2 230 67.4
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 5.9e-62 241.5 214 63.1
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.6e-59 233.4 213 62.4
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 2.6e-57 226.1 221 59.7
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.9e-56 222.6 193 63.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 8.3e-56 221.1 219 59.4
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 8.3e-56 221.1 215 58.6
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 3.2e-55 219.2 219 58.9
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 7.0e-55 218.0 219 57.5
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 7.0e-55 218.0 219 57.5
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 2.7e-54 216.1 213 60.1
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.7e-54 216.1 183 63.4
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.5e-54 215.7 190 61.1
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 4.6e-54 215.3 213 56.3
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.3e-53 213.8 215 55.8
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.0e-53 212.6 214 57.5
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 6.6e-53 211.5 219 55.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 8.6e-53 211.1 218 58.7
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.5e-52 210.3 217 56.7
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.5e-52 210.3 220 54.5
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 1.9e-52 209.9 213 54.5
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.3e-52 209.1 216 58.3
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 2.1e-51 206.5 198 59.1
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 6.2e-51 204.9 151 72.8
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 6.2e-51 204.9 180 62.8
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.4e-50 203.8 197 57.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 5.2e-50 201.8 213 57.7
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 5.2e-50 201.8 176 63.1
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 5.2e-50 201.8 184 60.9
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 8.9e-50 201.1 216 56.0
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.2e-49 200.7 190 59.5
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.5e-49 200.3 182 62.1
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.0e-49 199.9 117 85.5
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.0e-49 199.9 182 59.3
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.6e-49 199.5 186 60.2
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 5.8e-49 198.4 184 60.3
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 7.5e-49 198.0 187 59.9
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 9.8e-49 197.6 174 62.6
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.7e-48 196.8 160 65.6
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.2e-48 196.4 181 59.7
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 2.2e-48 196.4 214 54.2
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.2e-48 196.4 128 76.6
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.9e-48 196.1 214 56.1
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.7e-48 195.7 199 58.3
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 4.9e-48 195.3 214 53.7
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 6.4e-48 194.9 179 60.9
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 8.3e-48 194.5 115 84.3
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.9e-47 193.4 112 86.6
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.4e-47 193.0 191 59.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 3.2e-47 192.6 179 60.3
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 7.0e-47 191.4 212 56.1
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 7.0e-47 191.4 108 88.0
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 9.2e-47 191.0 187 58.3
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.6e-46 190.3 116 81.0
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 4.6e-46 188.7 114 81.6
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 7.8e-46 188.0 116 77.6
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 7.8e-46 188.0 116 79.3
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.3e-45 187.2 154 63.0
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.3e-45 187.2 185 55.7
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.7e-45 186.8 216 52.3
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.7e-45 186.8 216 52.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.7e-45 186.8 114 82.5
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.7e-45 186.8 127 75.6
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 3.0e-45 186.0 105 85.7
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 3.0e-45 186.0 103 86.4
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.9e-45 185.7 222 50.9
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.5e-44 183.7 128 71.9
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.9e-44 183.3 105 86.7
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.9e-44 183.3 126 74.6
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.5e-44 183.0 114 77.2
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 3.3e-44 182.6 128 73.4
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 7.3e-44 181.4 128 73.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 9.5e-44 181.0 107 85.0
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 1.2e-43 180.6 152 63.8
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.1e-43 179.9 215 50.7
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.6e-43 179.1 113 77.0
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 8.1e-43 177.9 114 76.3
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 8.1e-43 177.9 114 76.3
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 8.1e-43 177.9 114 76.3
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 8.1e-43 177.9 133 69.2
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.4e-42 177.2 114 76.3
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.8e-42 176.8 158 61.4
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 2.3e-42 176.4 135 66.7
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 3.1e-42 176.0 131 68.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 4.0e-42 175.6 100 87.0
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 6.8e-42 174.9 103 84.5
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 6.8e-42 174.9 215 52.1
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 6.8e-42 174.9 144 64.6
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 2.0e-41 173.3 159 61.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 2.6e-41 172.9 114 74.6
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 5.8e-41 171.8 144 63.9
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 9.8e-41 171.0 115 73.0
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.9e-40 169.5 113 74.3
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.7e-38 162.9 102 79.4
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.3e-37 159.8 102 76.5
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 3.0e-37 159.5 160 55.6
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.8e-35 152.9 111 65.8
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 4.7e-35 152.1 103 69.9
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 5.2e-34 148.7 106 64.2
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.6e-30 137.1 98 65.3
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 6.0e-30 135.2 91 72.5
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 4.3e-28 129.0 70 87.1
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.2e-27 127.5 78 78.2
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 7.1e-23 111.7 177 43.5
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 4.3e-20 102.4 93 53.8
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 2.4e-18 96.7 55 83.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 4.5e-17 92.4 62 74.2
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 7.6e-17 91.7 44 93.2
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 1.7e-16 90.5 77 57.1
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.6e-11 72.8 107 41.1
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 5.3e-10 68.9 44 70.5


User provided reference genes

Program Settings