Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G333800 Prunus persica HOM05D008835 ORTHO05D011094 8.6e-147 525.4 550 100.0
RcHm_v2.0_Chr4g0443001 Rosa chinensis HOM05D008835 ORTHO05D011094 7.3e-45 186.8 187 75.9
CANSAT01G3131 Cannabis sativa HOM05D008835 ORTHO05D011094 4.4e-42 177.6 189 48.1
Aa31LG2G8150 Aethionema arabicum HOM05D008835 ORTHO05D011094 4.6e-39 167.5 190 52.6
Dinv10471 Davidia involucrata HOM05D008835 ORTHO05D011094 1.5e-37 162.5 187 67.4
Sc15g0000240 Simmondsia chinensis HOM05D008835 ORTHO05D011094 2.5e-37 161.8 190 52.6
Thhalv10003932m.g Eutrema salsugineum HOM05D008835 ORTHO05D011094 7.3e-37 160.2 189 51.3
Cpa.g.sc2.190 Carica papaya HOM05D008835 ORTHO05D011094 1.2e-36 159.5 190 52.6
Sp2g13190 Schrenkiella parvula HOM05D008835 ORTHO05D011094 1.2e-36 159.5 189 49.2
AT2G01740 Arabidopsis thaliana HOM05D008835 ORTHO05D011094 1.4e-35 156.0 189 49.2
AL5G10840 Arabidopsis lyrata HOM05D008835 ORTHO05D011094 5.2e-35 154.1 189 49.2
BolC9t55906H Brassica oleracea HOM05D008835 ORTHO05D011094 1.3e-33 149.4 191 52.9
C09p30430 Brassica napus HOM05D008835 ORTHO05D011094 1.7e-33 149.1 191 52.4
BcaC04g21553 Brassica carinata HOM05D008835 ORTHO05D011094 6.4e-33 147.1 191 52.4
CARHR144310 Cardamine hirsuta HOM05D008835 ORTHO05D011094 1.2e-31 142.9 190 48.4
Hma1.2p1_0277F.1_g111660 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 2.1e-28 132.1 188 63.3
Hma1.2p1_0277F.1_g111665 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 2.1e-28 132.1 188 63.3
CSS0047579 Camellia sinensis var. sinensis HOM05D008835 ORTHO05D011094 8.1e-28 130.2 189 46.6
BraA09t37964Z Brassica rapa HOM05D008835 ORTHO05D011094 1.1e-27 129.8 191 48.7
Cc11_g07380 Coffea canephora HOM05D008835 ORTHO05D011094 5.2e-27 127.5 192 39.1
A09p23600 Brassica napus HOM05D008835 ORTHO05D011094 1.2e-26 126.3 191 48.2
CsaV3_5G014350 Cucumis sativus L. HOM05D008835 ORTHO05D011094 1.5e-26 125.9 187 43.3
COL.COLO4_16597 Corchorus olitorius HOM05D002001 ORTHO05D006833 1.1e-24 119.8 187 61.0
Sed0018402 Sechium edule HOM05D008835 ORTHO05D011094 3.5e-23 114.8 186 57.5
Carub.0005s0069 Capsella rubella HOM05D008835 ORTHO05D011094 1.0e-22 113.2 88 52.3
TAR374G1374 Trochodendron aralioides HOM05D008835 ORTHO05D011094 3.0e-22 111.7 186 59.7
Gorai.002G171900 Gossypium raimondii HOM05D008835 ORTHO05D011094 1.1e-21 109.8 218 51.4
Gohir.D01G139800 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.5e-21 109.4 218 51.4
Nn4g26594 Nelumbo nucifera HOM05D008835 ORTHO05D011094 3.6e-20 104.8 88 52.3
Gohir.A01G146600 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.5e-18 99.4 187 55.1
Lj3P864T25 Lonicera japonica HOM05D008835 ORTHO05D011094 3.8e-17 94.7 77 59.7
RcHm_v2.0_Chr2g0123271 Rosa chinensis HOM05D008835 ORTHO05D011094 1.5e-13 82.8 83 48.2
ATR0753G127 Amborella trichopoda HOM05D008835 ORTHO05D011094 4.3e-13 81.3 85 48.2
Actinidia34037 Actinidia chinensis HOM05D008835 ORTHO05D011094 1.6e-12 79.3 52 63.5
ClCG07G005540 Citrullus lanatus HOM05D008835 ORTHO05D011094 3.1e-11 75.1 53 62.3
Oeu044008.1 Olea europaea HOM05D008835 ORTHO05D011094 1.9e-08 65.9 52 57.7
Cc11_g07320 Coffea canephora HOM05D008835 ORTHO05D011094 3.0e-06 58.5 49 49.0
Thecc.02G293200 Theobroma cacao HOM05D008835 ORTHO05D030527 3.9e-06 58.2 102 33.3


User provided reference genes

Program Settings