Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 3.4e-206 721.5 371 100.0
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 3.9e-186 654.8 372 91.4
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 5.4e-180 634.4 369 88.9
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 1.0e-178 630.2 369 88.1
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.0e-174 615.9 376 85.6
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 6.4e-173 610.9 376 84.8
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.6e-171 606.3 394 81.2
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 8.4e-157 557.4 338 84.0
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 3.2e-156 555.4 335 84.8
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 3.5e-155 552.0 357 79.6
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 3.5e-155 552.0 335 83.9
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 7.9e-155 550.8 335 83.3
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 1.3e-154 550.1 352 79.3
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 1.3e-154 550.1 346 79.5
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.8e-154 549.7 423 72.1
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 3.0e-154 548.9 354 78.2
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 5.1e-154 548.1 335 83.6
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 5.1e-154 548.1 353 78.8
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 5.1e-154 548.1 352 78.4
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 5.1e-154 548.1 344 82.3
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 8.7e-154 547.4 335 81.5
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 1.9e-153 546.2 337 80.7
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 2.1e-152 542.7 338 83.1
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 3.7e-152 542.0 338 80.8
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 2.4e-151 539.3 342 79.8
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 1.2e-150 537.0 335 81.8
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 1.5e-150 536.6 341 80.6
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 2.0e-150 536.2 351 78.3
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.3e-149 533.5 388 71.4
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 1.3e-149 533.5 331 81.6
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 1.7e-149 533.1 338 81.1
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 2.2e-149 532.7 368 75.0
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 3.8e-149 531.9 330 81.5
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 5.0e-149 531.6 338 81.1
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 1.9e-148 529.6 340 79.4
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 2.5e-148 529.3 313 85.9
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 3.2e-148 528.9 335 81.5
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 5.5e-148 528.1 328 82.6
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 5.5e-148 528.1 345 79.7
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 7.2e-148 527.7 335 81.8
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 7.2e-148 527.7 338 80.2
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 7.2e-148 527.7 367 74.4
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 1.6e-147 526.6 399 71.2
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 3.0e-146 522.3 348 78.4
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 3.3e-145 518.8 338 78.1
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 9.7e-145 517.3 317 81.4
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 1.3e-144 516.9 338 78.7
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 2.8e-144 515.8 335 78.8
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 2.8e-144 515.8 350 77.1
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 6.3e-144 514.6 339 77.9
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 1.1e-143 513.8 340 76.5
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 1.1e-143 513.8 335 78.5
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 1.4e-143 513.5 329 81.2
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 1.8e-143 513.1 335 78.8
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 1.8e-143 513.1 335 78.5
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 3.1e-143 512.3 335 79.4
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 3.1e-143 512.3 342 77.5
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 4.1e-143 511.9 335 79.4
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 4.1e-143 511.9 337 78.3
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 4.1e-143 511.9 335 78.2
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 9.0e-143 510.8 337 78.3
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 1.5e-142 510.0 335 77.3
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 3.4e-142 508.8 356 75.0
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 4.5e-142 508.4 315 81.3
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 1.0e-141 507.3 337 78.0
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.7e-141 506.5 352 76.1
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 1.7e-141 506.5 335 78.5
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 2.2e-141 506.1 336 77.7
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 2.9e-141 505.8 337 77.7
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 6.5e-141 504.6 337 77.4
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 6.5e-141 504.6 337 77.4
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.1e-140 503.8 335 78.2
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 1.9e-140 503.1 311 82.3
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 1.6e-139 500.0 317 80.1
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 1.8e-138 496.5 339 75.5
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 6.7e-138 494.6 311 80.4
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 1.8e-135 486.5 302 82.1
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 2.4e-135 486.1 335 76.1
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 4.5e-134 481.9 336 71.4
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 7.7e-134 481.1 315 79.0
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 1.3e-133 480.3 345 71.0
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 6.5e-133 478.0 353 72.2
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 9.4e-132 474.2 314 75.8
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 1.2e-131 473.8 307 79.8
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.1e-131 473.0 312 78.5
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 5.7e-129 464.9 330 74.8
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 8.2e-128 461.1 335 73.4
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 1.8e-127 459.9 289 81.3
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 4.1e-127 458.8 287 81.9
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 9.1e-127 457.6 340 73.2
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 4.5e-126 455.3 282 81.6
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 2.2e-125 453.0 295 78.3
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 9.4e-124 447.6 313 71.6
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 6.7e-122 441.4 323 71.8
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 1.5e-121 440.3 280 80.4
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 2.4e-119 433.0 339 67.0
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 2.0e-118 429.9 342 69.0
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 2.7e-118 429.5 348 65.8
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 9.4e-116 421.0 313 69.0
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 5.4e-111 405.2 298 67.8
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 5.9e-110 401.7 334 63.5
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.6e-107 393.7 242 83.9
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 8.3e-104 381.3 255 74.5
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 2.8e-99 366.3 221 82.8
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 4.0e-98 362.5 232 78.0
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 7.8e-86 321.6 303 57.1
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 3.3e-84 316.2 302 56.0
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 2.3e-82 310.1 312 54.5
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.9e-80 303.1 230 67.0
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.1e-79 301.2 187 81.3
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 5.4e-79 298.9 192 79.7
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 1.7e-72 277.3 234 64.1
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 9.6e-68 261.5 167 80.8
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 8.9e-66 255.0 341 47.8
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.6e-59 234.2 286 50.7
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 8.1e-59 231.9 151 76.8
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 4.6e-54 216.1 160 70.6
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 2.4e-50 203.8 148 69.6
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 7.6e-49 198.7 117 81.2
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.3e-45 188.0 112 81.2
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 3.0e-45 186.8 242 51.2
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 7.6e-41 172.2 151 58.9
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.5e-36 157.9 280 35.7
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.3e-35 154.8 110 68.2
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.4e-34 151.4 259 40.5
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 5.3e-34 149.4 265 38.5
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 7.2e-31 139.0 85 77.6
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 1.3e-29 134.8 243 41.2
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 6.3e-27 125.9 101 67.3
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 5.0e-24 116.3 76 69.7
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 6.5e-24 115.9 81 71.6
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.1e-20 105.1 109 56.0
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.1e-18 97.1 62 83.9
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.5e-17 94.7 54 81.5
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 2.9e-16 90.5 113 46.0
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.4e-15 88.2 67 70.1
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.9e-15 87.8 88 59.1
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 7.2e-15 85.9 62 66.1
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 1.5e-12 78.2 55 69.1
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 9.7e-12 75.5 43 81.4
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.4e-10 70.9 71 53.5


User provided reference genes

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