Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 9.7e-217 756.5 380 100.0
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 5.5e-188 661.0 357 91.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.0e-177 625.9 358 87.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.0e-177 625.9 358 87.4
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.4e-176 620.9 358 86.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 9.2e-175 617.1 358 86.9
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.5e-172 607.1 388 80.4
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 9.5e-164 580.5 361 82.3
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 5.2e-162 574.7 360 80.8
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 9.9e-161 570.5 361 79.2
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.9e-159 566.2 361 80.1
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.6e-157 557.8 311 88.7
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.3e-156 555.4 353 79.6
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 7.3e-156 554.3 353 79.0
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.6e-155 553.1 343 81.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 4.7e-155 551.6 355 78.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.4e-154 549.3 358 77.4
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 6.8e-154 547.7 351 79.2
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.5e-153 546.6 360 76.1
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.9e-152 542.3 361 77.0
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 4.9e-152 541.6 353 79.3
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 4.9e-152 541.6 344 79.9
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 8.4e-152 540.8 365 75.9
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.4e-151 540.0 362 76.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.6e-150 536.6 367 74.9
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.6e-150 536.6 335 81.2
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 3.5e-150 535.4 318 84.3
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 6.0e-150 534.6 359 77.4
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.3e-149 533.5 342 79.2
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.0e-149 532.3 357 76.2
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.0e-149 532.3 357 76.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.9e-149 531.9 379 73.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 8.7e-149 530.8 330 80.0
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.5e-148 529.3 360 75.8
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 7.3e-148 527.7 351 77.8
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.2e-147 526.9 331 77.9
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 6.2e-147 524.6 362 74.9
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 8.1e-147 524.2 310 83.5
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 1.8e-146 523.1 362 74.6
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 6.9e-146 521.2 330 78.5
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 7.6e-145 517.7 330 77.3
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.9e-144 515.8 356 72.8
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 4.9e-144 515.0 377 70.0
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.4e-143 513.5 335 74.9
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.4e-143 513.5 356 72.2
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 9.3e-143 510.8 319 78.1
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.2e-142 510.4 311 81.7
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.1e-142 509.6 342 75.1
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 3.5e-142 508.8 361 71.2
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 4.6e-142 508.4 342 75.4
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 4.6e-142 508.4 327 76.8
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 6.0e-142 508.1 330 76.7
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 6.0e-142 508.1 341 74.2
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.0e-141 507.3 353 73.7
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 3.0e-141 505.8 327 76.8
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 5.1e-141 505.0 388 69.1
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.3e-139 500.4 361 72.0
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 3.6e-139 498.8 357 71.4
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 6.2e-139 498.0 353 72.0
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 8.1e-139 497.7 338 74.0
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 1.8e-138 496.5 353 70.5
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 2.2e-136 489.6 368 69.6
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.2e-136 489.6 337 72.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.8e-136 488.8 365 67.1
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.4e-135 486.1 330 75.5
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.2e-134 483.8 389 66.3
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.3e-132 475.7 319 74.9
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.8e-131 471.9 401 65.3
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 6.9e-130 468.0 359 70.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 7.6e-129 464.5 329 72.9
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 7.6e-129 464.5 321 70.1
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 1.3e-128 463.8 321 69.2
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.0e-122 442.2 338 65.7
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.0e-122 442.2 338 65.7
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 4.3e-116 422.2 266 79.3
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.0e-113 413.3 268 76.9
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 4.5e-113 412.1 359 63.2
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 8.5e-112 407.9 316 69.9
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.4e-109 400.6 366 57.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 8.8e-109 397.9 271 73.1
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.1e-101 372.1 251 75.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.2e-95 352.8 338 55.3
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.0e-80 304.7 241 64.7
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 3.8e-80 302.8 175 81.1
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 9.5e-71 271.6 202 66.8
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.5e-68 264.2 320 46.2
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.5e-68 264.2 240 59.6
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.2e-60 238.0 145 78.6
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 2.2e-35 154.1 104 76.0
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.6e-33 146.4 91 80.2
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.2e-12 78.6 77 57.1
MBI11_g02080_MAGBIO Magnolia biondii HOM05D049150 ORTHO05D048537 3.7e-06 57.0 37 75.7


User provided reference genes

Program Settings