Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G315200 Prunus persica HOM05D000260 ORTHO05D022715 1.4e-136 489.6 233 100.0
Prupe.1G315400 Prunus persica HOM05D000072 ORTHO05D000026 4.5e-47 192.2 230 52.6
FAN17G2038 Fragaria x ananassa HOM05D000260 ORTHO05D000318 3.0e-43 179.5 250 42.4
FAN12G0680 Fragaria x ananassa HOM05D000260 ORTHO05D000318 2.5e-42 176.4 248 44.0
FAN12G0686 Fragaria x ananassa HOM05D000260 ORTHO05D000318 2.5e-42 176.4 248 44.0
MD16G1037800 Malus domestica HOM05D000260 ORTHO05D022715 5.7e-42 175.3 245 45.7
FvH4_4g26841 Fragaria vesca HOM05D000260 ORTHO05D000318 9.7e-42 174.5 242 44.2
FAN22G0230 Fragaria x ananassa HOM05D000260 ORTHO05D000318 5.3e-40 168.7 250 43.6
MD13G1036700 Malus domestica HOM05D000072 ORTHO05D000026 4.5e-39 165.6 229 44.1
MD16G1038000 Malus domestica HOM05D000072 ORTHO05D000026 2.9e-38 162.9 243 46.5
MD16G1038700 Malus domestica HOM05D000072 ORTHO05D000026 2.9e-38 162.9 245 44.1
MD16G1038600 Malus domestica HOM05D000072 ORTHO05D000026 4.6e-36 155.6 237 44.3
FvH4_4g26940 Fragaria vesca HOM05D000072 ORTHO05D000026 1.0e-35 154.5 250 42.0
FvH4_4g26892 Fragaria vesca HOM05D000072 ORTHO05D000026 1.8e-35 153.7 245 38.8
FAN12G2395 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.9e-34 150.2 245 41.6
RcHm_v2.0_Chr4g0434651 Rosa chinensis HOM05D000260 ORTHO05D022715 1.7e-33 147.1 255 39.2
RcHm_v2.0_Chr4g0434531 Rosa chinensis HOM05D000260 ORTHO05D000318 1.4e-32 144.1 239 39.3
FAN07G2859 Fragaria x ananassa HOM05D000260 ORTHO05D000318 2.0e-31 140.2 267 36.7
FvH4_4g26890 Fragaria vesca HOM05D000072 ORTHO05D000026 3.4e-31 139.4 242 39.7
FAN09G2053 Fragaria x ananassa HOM05D000260 ORTHO05D022715 5.5e-29 132.1 208 41.3
FAN07G0021 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.2e-29 131.7 257 37.7
FAN07G2609 Fragaria x ananassa HOM05D000072 ORTHO05D022715 2.7e-28 129.8 218 39.4
FAN12G3479 Fragaria x ananassa HOM05D000072 ORTHO05D001031 6.1e-28 128.6 257 38.1
FAN17G3025 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.4e-27 127.5 228 39.9
FAN12G0737 Fragaria x ananassa HOM05D000260 ORTHO05D022715 2.3e-27 126.7 209 39.7
FAN17G2553 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.2e-25 118.2 213 37.1
Potri.010G121350 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.2e-23 114.4 257 35.8
FvH4_4g26840 Fragaria vesca HOM05D000260 ORTHO05D000318 1.7e-22 110.5 227 36.1
FAN12G1998 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.8e-22 109.4 192 40.1
FAN12G1426 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.4e-21 107.5 227 34.8
Potri.010G121025 Populus trichocarpa HOM05D008908 ORTHO05D010362 2.1e-20 103.6 212 36.3
Potri.010G121100 Populus trichocarpa HOM05D000260 ORTHO05D000318 3.0e-19 99.8 245 33.9
Dinv31610 Davidia involucrata HOM05D000260 ORTHO05D010362 1.4e-16 90.9 273 30.4
Manes.06G065500 Manihot esculenta HOM05D000260 ORTHO05D000318 5.3e-16 89.0 252 31.0
QL01p040233 Quercus lobata HOM05D000260 ORTHO05D000318 7.0e-16 88.6 252 29.0
QL05p056320 Quercus lobata HOM05D000072 ORTHO05D000026 3.5e-15 86.3 233 29.6
Thecc.02G224000 Theobroma cacao HOM05D016466 ORTHO05D010362 3.5e-15 86.3 251 29.5
QL01p002259 Quercus lobata HOM05D000072 ORTHO05D000026 4.5e-15 85.9 214 33.2
Haze_00644 Corylus avellana HOM05D000260 ORTHO05D000318 7.7e-15 85.1 245 31.4
QL01p040218 Quercus lobata HOM05D000260 ORTHO05D000318 8.5e-14 81.6 241 31.1
RcHm_v2.0_Chr4g0434681 Rosa chinensis HOM05D000072 ORTHO05D000026 1.6e-12 77.4 158 36.7
Migut.L01035 Erythranthe guttata HOM05D000260 ORTHO05D000318 3.6e-12 76.3 198 31.3
Ciclev10014945m.g Citrus clementina HOM05D000072 ORTHO05D000026 4.7e-12 75.9 258 29.1
Ciclev10014231m.g Citrus clementina HOM05D000072 ORTHO05D000026 1.0e-11 74.7 208 29.3
GSVIVG01011850001 Vitis vinifera HOM05D000260 ORTHO05D000318 1.0e-11 74.7 265 30.6
A07p12570 Brassica napus HOM05D000260 ORTHO05D000318 2.3e-11 73.6 193 30.6
BraA09t39426Z Brassica rapa HOM05D000260 ORTHO05D000318 2.3e-11 73.6 233 28.3
Ciclev10014868m.g Citrus clementina HOM05D000072 ORTHO05D000026 3.0e-11 73.2 212 30.2
Ciclev10016350m.g Citrus clementina HOM05D008908 ORTHO05D010362 4.0e-11 72.8 232 27.6
QL01p010170 Quercus lobata HOM05D000260 ORTHO05D000318 5.2e-11 72.4 225 29.3
BraA07t29035Z Brassica rapa HOM05D000260 ORTHO05D000318 6.7e-11 72.0 193 30.1
QL01p010994 Quercus lobata HOM05D000072 ORTHO05D000026 1.2e-10 71.2 228 30.3
CANSAT01G0046 Cannabis sativa HOM05D000260 ORTHO05D000318 2.0e-10 70.5 242 29.8
Manes.14G105900 Manihot esculenta HOM05D000260 ORTHO05D000318 2.0e-10 70.5 196 32.1
Ciclev10014492m.g Citrus clementina HOM05D000260 ORTHO05D000318 3.3e-10 69.7 225 28.9
Sp1g22830 Schrenkiella parvula HOM05D000260 ORTHO05D000318 7.5e-10 68.6 247 27.5
HanXRQChr15g0477491 Helianthus annuus HOM05D000072 ORTHO05D000026 2.8e-09 66.6 189 29.6
Lj3A880G112 Lonicera japonica HOM05D000260 ORTHO05D010362 2.8e-09 66.6 210 29.0
Oeu054974.1 Olea europaea HOM05D000260 ORTHO05D000318 2.8e-09 66.6 217 31.8
QL05p057061 Quercus lobata HOM05D046585 ORTHO05D026090 4.8e-09 65.9 146 34.2
Migut.L01038 Erythranthe guttata HOM05D000072 ORTHO05D000026 8.2e-09 65.1 230 29.1
Migut.L01037 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.4e-08 64.3 185 30.3
vmacro10595 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 5.9e-07 58.9 208 26.0
Oeu027004.1 Olea europaea HOM05D000260 ORTHO05D000318 1.7e-06 57.4 158 30.4
SalBow8G0487 Salvia bowleyana HOM05D000260 ORTHO05D000318 2.2e-06 57.0 214 29.9


User provided reference genes

Program Settings