Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 2.8e-202 708.4 352 100.0
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 8.3e-162 573.9 344 84.6
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.0e-143 513.8 339 77.6
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 8.6e-135 484.2 337 74.8
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 4.4e-131 471.9 346 70.2
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 5.4e-129 464.9 286 79.4
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 9.2e-129 464.2 350 67.1
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 3.9e-127 458.8 353 67.1
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 8.6e-127 457.6 343 68.5
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 7.3e-126 454.5 360 65.8
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.1e-125 453.0 319 70.8
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 2.1e-125 453.0 351 67.2
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.8e-125 452.6 327 67.6
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 3.1e-124 449.1 345 65.8
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 3.4e-123 445.7 295 74.2
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 7.6e-123 444.5 296 72.3
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.3e-122 443.7 351 63.5
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-122 443.0 351 63.5
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-122 443.0 351 63.5
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 2.2e-122 443.0 338 65.4
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.7e-122 442.2 351 63.2
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 6.4e-122 441.4 347 64.3
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 6.4e-122 441.4 366 64.2
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.9e-121 439.9 279 75.6
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 9.2e-121 437.6 345 63.8
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 2.7e-120 436.0 346 63.6
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 2.7e-120 436.0 336 64.6
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 2.7e-120 436.0 280 74.6
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.7e-119 433.3 340 64.7
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 6.6e-119 431.4 341 66.0
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 5.6e-118 428.3 318 67.0
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 2.8e-117 426.0 309 66.0
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 3.6e-117 425.6 350 60.0
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 4.7e-117 425.2 349 60.5
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 1.4e-116 423.7 350 62.3
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.8e-116 423.3 268 78.4
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 3.1e-116 422.5 312 65.4
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 4.0e-116 422.2 315 65.1
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 5.2e-116 421.8 341 64.5
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 8.9e-116 421.0 340 62.4
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 8.9e-116 421.0 286 69.9
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 3.4e-115 419.1 271 73.1
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 5.8e-115 418.3 261 73.2
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 5.8e-115 418.3 261 73.6
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 7.6e-115 417.9 274 71.2
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 7.6e-115 417.9 274 71.2
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 7.6e-115 417.9 274 71.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 7.6e-115 417.9 415 55.4
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.7e-114 416.8 275 71.3
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 3.8e-114 415.6 275 70.9
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 3.8e-114 415.6 339 64.6
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 6.4e-114 414.8 261 73.9
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 6.4e-114 414.8 261 73.2
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.4e-113 413.7 226 87.2
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.9e-113 413.3 335 61.8
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 1.9e-113 413.3 341 63.3
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 1.9e-113 413.3 262 73.3
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.9e-113 413.3 261 73.2
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 7.1e-113 411.4 262 72.5
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 7.1e-113 411.4 358 62.0
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.6e-112 410.2 285 68.1
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.1e-112 409.8 226 85.8
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 3.0e-111 406.0 291 68.7
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 5.1e-111 405.2 262 71.4
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 4.3e-110 402.1 291 66.0
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 6.2e-109 398.3 384 53.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 3.1e-108 396.0 269 69.9
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 4.0e-108 395.6 296 63.5
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 5.3e-108 395.2 319 60.5
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 8.4e-106 387.9 381 53.0
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 5.4e-105 385.2 271 72.0
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 7.1e-105 384.8 251 72.1
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 1.2e-104 384.0 251 69.7
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 3.5e-104 382.5 261 67.4
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 4.6e-104 382.1 265 69.1
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 4.6e-104 382.1 289 66.1
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 6.0e-104 381.7 252 68.3
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 9.9e-99 364.4 245 67.8
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 7.1e-97 358.2 263 64.3
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 1.6e-93 347.1 328 54.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 8.1e-93 344.7 325 55.7
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 1.4e-92 344.0 297 57.6
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 9.0e-92 341.3 184 88.0
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 9.3e-89 331.3 184 85.3
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 2.1e-85 320.1 210 71.4
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.1e-85 320.1 261 60.2
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 3.7e-85 319.3 258 64.7
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 6.9e-84 315.1 281 54.8
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 2.6e-83 313.2 228 64.0
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 1.2e-80 304.3 198 70.2
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 3.9e-79 299.3 254 58.7
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.5e-78 296.6 193 71.0
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 2.5e-78 296.6 180 77.8
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.1e-76 291.2 231 60.2
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.1e-76 291.2 231 60.2
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 7.2e-73 278.5 164 75.6
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 4.6e-72 275.8 273 49.1
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 4.3e-70 269.2 170 72.4
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.8e-69 266.5 186 66.7
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 3.7e-69 266.2 275 46.5
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.1e-64 250.4 344 44.5
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.1e-64 250.4 344 44.5
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 1.3e-61 241.1 182 64.8
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 5.9e-59 232.3 273 44.7
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.7e-58 230.7 191 60.7
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 2.4e-52 210.3 131 71.8
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 9.1e-52 208.4 131 71.8
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 7.2e-49 198.7 200 55.0
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.4e-44 183.7 131 66.4
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 2.0e-38 164.1 246 37.0
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 1.6e-35 154.5 91 83.5
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 2.4e-28 130.6 121 53.7
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 2.3e-26 124.0 317 30.3
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 2.3e-26 124.0 305 31.8
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 4.9e-21 106.3 73 65.8
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 6.0e-19 99.4 148 43.9
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.6e-16 91.3 265 29.8
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 1.4e-15 88.2 114 45.6
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 1.2e-06 58.5 54 53.7


User provided reference genes

Program Settings