Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 4.8e-70 267.7 133 100.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 1.0e-16 90.5 136 47.8
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 2.6e-15 85.9 131 45.8
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 2.8e-14 82.4 132 44.7
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 4.9e-14 81.6 109 45.9
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 1.8e-13 79.7 119 46.2
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 9.2e-13 77.4 130 40.8
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.2e-12 77.0 132 39.4
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 1.0e-11 73.9 116 43.1
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 1.3e-11 73.6 121 48.8
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.9e-11 72.4 124 39.5
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 2.9e-11 72.4 128 36.7
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 2.9e-11 72.4 114 41.2
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 8.6e-11 70.9 124 41.1
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 1.9e-10 69.7 124 41.1
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 1.9e-10 69.7 100 49.0
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 3.3e-10 68.9 122 37.7
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 3.3e-10 68.9 138 39.9
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 3.3e-10 68.9 120 39.2
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 5.6e-10 68.2 118 41.5
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 9.5e-10 67.4 119 40.3
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.2e-09 67.0 113 36.3
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 3.6e-09 65.5 120 40.0
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 4.7e-09 65.1 105 40.0
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 6.1e-09 64.7 134 38.1
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.0e-08 63.9 113 35.4
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 1.4e-08 63.5 104 36.5
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.4e-08 63.5 115 38.3
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.8e-08 63.2 125 41.6
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 2.3e-08 62.8 105 37.1
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 3.1e-08 62.4 127 39.4
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.2e-08 61.6 114 34.2
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 5.2e-08 61.6 119 35.3
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 5.2e-08 61.6 122 36.1
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 6.8e-08 61.2 116 33.6
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.5e-07 60.1 120 38.3
FAN07G2083 Fragaria x ananassa HOM05D022909 ORTHO05D009661 1.5e-07 60.1 121 39.7
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 1.5e-07 60.1 126 36.5
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 2.0e-07 59.7 129 35.7
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 2.0e-07 59.7 136 37.5
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 2.0e-07 59.7 98 33.7
FvH4_4g27740 Fragaria vesca HOM05D022909 ORTHO05D009661 2.6e-07 59.3 121 39.7
FAN12G3934 Fragaria x ananassa HOM05D022909 ORTHO05D009661 2.6e-07 59.3 121 39.7
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.4e-07 58.9 140 36.4
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 3.4e-07 58.9 131 39.7
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 4.4e-07 58.5 98 43.9
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.3e-06 57.0 130 36.9
ECA233G2952 Erigeron canadensis HOM05D007842 ORTHO05D009661 3.7e-06 55.5 115 33.9
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 3.7e-06 55.5 114 32.5
PGR119G2463 Punica granatum HOM05D007842 ORTHO05D009661 8.3e-06 54.3 119 34.5


User provided reference genes

Program Settings