Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 2.3e-260 901.7 460 100.0
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 4.2e-206 721.5 462 82.3
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.2e-191 672.5 460 76.3
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.1e-188 661.4 461 75.1
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 2.0e-187 659.4 461 75.1
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.9e-184 647.9 409 80.0
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.5e-176 622.1 408 77.9
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 3.8e-175 618.6 432 72.7
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 3.8e-175 618.6 432 72.7
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 8.5e-175 617.5 450 70.0
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.5e-174 615.9 461 71.8
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 4.0e-172 608.6 428 70.6
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.5e-171 606.7 439 70.4
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.2e-168 597.0 422 69.7
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.0e-164 583.9 436 68.1
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.4e-163 578.9 416 69.2
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 7.5e-163 577.8 450 66.2
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.3e-162 577.0 456 65.8
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 2.8e-162 575.9 449 65.7
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 2.4e-161 572.8 450 65.3
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.1e-161 572.0 413 68.5
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 4.1e-161 572.0 437 66.6
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.0e-160 569.7 438 66.2
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.1e-158 563.9 408 70.1
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 3.2e-158 562.4 424 69.3
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 2.1e-157 559.7 426 66.2
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.4e-156 557.0 451 64.5
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 3.0e-156 555.8 434 66.1
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.0e-155 553.1 421 68.9
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 1.7e-154 550.1 407 68.1
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.1e-153 547.4 459 63.0
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.4e-153 547.0 420 66.7
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.4e-153 547.0 454 64.1
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 3.1e-153 545.8 426 65.0
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 4.1e-153 545.4 457 63.2
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 5.4e-153 545.0 408 68.9
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 5.4e-153 545.0 408 67.4
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 7.0e-153 544.7 467 61.2
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 9.2e-153 544.3 437 64.1
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 2.0e-152 543.1 460 61.7
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.8e-151 538.9 439 63.3
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 6.6e-151 538.1 402 67.9
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 4.3e-150 535.4 454 62.6
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 3.6e-149 532.3 423 65.0
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 4.7e-149 531.9 466 60.9
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 6.8e-148 528.1 447 62.6
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 5.7e-147 525.0 459 59.9
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 7.5e-147 524.6 439 62.2
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 9.8e-147 524.2 430 62.3
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 9.8e-147 524.2 406 67.2
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.7e-146 523.5 435 62.3
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 3.7e-146 522.3 435 61.8
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 4.9e-146 521.9 439 61.7
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 4.9e-146 521.9 447 61.3
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.2e-145 519.2 433 61.2
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 3.2e-145 519.2 382 68.6
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 4.1e-145 518.8 460 59.3
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.2e-144 517.3 439 60.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.2e-144 517.3 428 61.7
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 2.7e-144 516.2 435 61.6
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 4.6e-144 515.4 435 61.6
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 5.9e-144 515.0 466 59.2
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 1.3e-143 513.8 460 59.1
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.3e-143 513.8 435 61.1
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.7e-143 513.5 435 61.4
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.3e-143 513.1 446 61.0
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 3.9e-143 512.3 433 61.2
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 3.9e-143 512.3 427 62.8
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 6.6e-143 511.5 406 64.8
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.5e-142 509.6 411 63.0
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 2.5e-142 509.6 378 66.7
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 7.3e-142 508.1 412 61.2
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 9.5e-142 507.7 454 58.8
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.2e-141 507.3 436 60.8
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.1e-137 494.2 361 68.1
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 5.0e-135 485.3 378 64.3
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 2.3e-132 476.5 412 60.4
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 3.1e-132 476.1 456 55.5
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 2.7e-128 463.0 333 70.0
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.3e-127 460.7 333 70.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 8.9e-124 448.0 437 55.6
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 1.2e-123 447.6 409 57.9
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 9.9e-123 444.5 482 50.8
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 2.3e-119 433.3 359 59.9
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 3.9e-119 432.6 331 66.8
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 5.2e-116 422.2 335 63.6
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 5.2e-116 422.2 402 54.2
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.9e-114 415.6 413 52.8
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 9.3e-113 411.4 297 69.0
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 8.1e-109 398.3 297 68.0
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 3.9e-103 379.4 297 64.0
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 3.9e-103 379.4 555 42.3
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.8e-100 370.5 407 48.4
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.6e-96 357.5 259 68.3
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 3.5e-96 356.3 310 59.4
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 4.6e-96 355.9 462 44.8
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.0e-95 354.8 310 59.7
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.1e-95 352.4 372 50.5
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 9.3e-89 331.6 428 41.6
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 4.1e-84 316.2 417 43.9
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.5e-82 308.9 332 49.1
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.0e-79 301.6 232 65.1
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.0e-50 205.3 154 63.6
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.8e-50 203.4 246 45.1
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 8.5e-50 202.2 150 67.3
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 4.0e-47 193.4 146 61.6
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 5.2e-47 193.0 174 55.7
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 6.5e-42 176.0 169 55.0
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 4.7e-40 169.9 147 61.9
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.8e-32 144.1 119 62.2
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.8e-31 141.4 96 70.8
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.3e-26 124.4 110 56.4
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.9e-25 121.3 123 57.7
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.2e-24 118.6 95 63.2
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.8e-23 114.8 91 60.4
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.3e-09 67.0 48 66.7


User provided reference genes

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