Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 2.7e-152 542.0 275 100.0
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 2.7e-91 339.3 275 64.4
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 1.9e-89 333.2 275 63.3
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 4.3e-89 332.0 276 64.9
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 1.1e-63 247.7 279 52.3
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 4.9e-61 238.8 281 52.7
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.9e-37 159.8 274 41.2
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.4e-36 157.5 273 42.1
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 6.1e-35 152.1 266 37.2
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 3.9e-34 149.4 286 37.4
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 5.1e-34 149.1 266 37.2
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 1.4e-31 141.0 270 35.6
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.9e-30 135.6 268 39.6
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 5.9e-30 135.6 273 41.0
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 7.7e-30 135.2 268 39.6
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 2.7e-27 126.7 266 38.0
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 3.6e-27 126.3 263 36.9
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.1e-27 125.6 275 36.0
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.5e-25 120.2 266 33.8
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 1.7e-24 117.5 258 34.5
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 6.3e-24 115.5 275 36.7
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 2.4e-23 113.6 266 33.8
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 4.1e-23 112.8 227 37.9
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 5.3e-23 112.5 273 31.5
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 2.0e-22 110.5 275 33.5
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.1e-20 104.8 245 33.5
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 1.1e-20 104.8 230 36.1
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 1.4e-20 104.4 269 32.7
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.7e-19 100.1 255 31.8
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.4e-18 97.8 259 27.8
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.0e-17 94.0 268 30.6
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.0e-17 94.0 261 30.7
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.3e-16 91.3 259 30.1
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 1.3e-16 91.3 128 43.0
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-16 90.5 259 29.0
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-16 90.5 255 30.6
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 8.2e-16 88.6 271 31.4
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.8e-15 87.4 269 29.4
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 3.1e-15 86.7 234 31.2
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 5.3e-15 85.9 246 30.5
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 7.0e-15 85.5 269 30.5
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.6e-14 84.3 246 30.1
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 4.5e-14 82.8 261 29.9
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 1.7e-13 80.9 237 32.1
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.7e-13 80.9 237 32.1
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 9.4e-12 75.1 267 28.5
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.2e-11 74.7 189 32.3
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.2e-11 74.7 189 32.3
Hma1.2p1_0116F.1_g056080 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 3.6e-11 73.2 104 46.2
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 4.7e-11 72.8 251 29.5
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 1.5e-09 67.8 233 27.0
DCAR_022572 Daucus carota HOM05D008244 ORTHO05D009402 1.5e-09 67.8 196 29.6
Zm00001eb096930 Zea mays HOM05D007873 ORTHO05D008474 3.3e-09 66.6 262 25.6
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 4.4e-09 66.2 237 29.1
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 1.1e-07 61.6 222 29.3
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 1.4e-07 61.2 218 28.4
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 1.4e-07 61.2 236 28.0
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 3.1e-07 60.1 222 28.8
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 7.0e-07 58.9 239 26.8
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 7.0e-07 58.9 222 27.0
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 9.1e-07 58.5 235 28.5
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 1.2e-06 58.2 240 26.7
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 1.2e-06 58.2 229 28.4
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.2e-06 58.2 236 26.3
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 2.7e-06 57.0 225 28.0


User provided reference genes

Program Settings