Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G293600 Prunus persica HOM05D008548 ORTHO05D010565 6.5e-73 277.3 143 100.0
MD16G1055300 Malus domestica HOM05D008548 ORTHO05D010565 1.8e-30 136.3 147 57.8
MD13G1056400 Malus domestica HOM05D008548 ORTHO05D010565 2.3e-30 136.0 149 60.4
FvH4_4g29280 Fragaria vesca HOM05D023608 ORTHO05D010565 3.5e-26 122.1 148 54.1
FAN12G2598 Fragaria x ananassa HOM05D023608 ORTHO05D010565 3.5e-26 122.1 148 54.1
Duzib251G0541 Durio zibethinus HOM05D008548 ORTHO05D010565 1.3e-25 120.2 142 54.2
FAN22G1173 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.3e-25 120.2 149 55.0
Thecc.02G322600 Theobroma cacao HOM05D008548 ORTHO05D010565 6.6e-25 117.9 139 55.4
FAN17G1069 Fragaria x ananassa HOM05D023608 ORTHO05D010565 2.5e-24 115.9 149 55.0
Gohir.A13G088200 Gossypium hirsutum HOM05D008548 ORTHO05D010565 1.4e-22 110.2 140 53.6
Duzib248G0997 Durio zibethinus HOM05D008548 ORTHO05D010565 4.4e-21 105.1 137 50.4
Gohir.D13G085600 Gossypium hirsutum HOM05D008548 ORTHO05D010565 5.8e-21 104.8 140 52.9
Gorai.013G097500 Gossypium raimondii HOM05D008548 ORTHO05D010565 9.8e-21 104.0 142 52.8
Glyma.02G122800 Glycine max HOM05D008548 ORTHO05D010565 6.4e-20 101.3 147 46.3
Ciclev10033730m.g Citrus clementina HOM05D008548 ORTHO05D010565 1.2e-18 97.1 138 46.4
VMungo1215G2679 Vigna mungo HOM05D008548 ORTHO05D010565 2.7e-18 95.9 143 44.8
QL03p073326 Quercus lobata HOM05D008548 ORTHO05D010565 3.5e-18 95.5 139 46.0
Lj2g0005577 Lotus japonicus HOM05D008548 ORTHO05D010565 7.8e-18 94.4 148 48.6
Glyma.01G065000 Glycine max HOM05D008548 ORTHO05D010565 1.0e-17 94.0 145 47.6
Phvul.003G038200 Phaseolus vulgaris HOM05D008548 ORTHO05D010565 8.6e-17 90.9 143 44.1
Potri.010G138001 Populus trichocarpa HOM05D008548 ORTHO05D010565 8.6e-17 90.9 145 43.4
Gorai.005G147800 Gossypium raimondii HOM05D008548 ORTHO05D010565 1.9e-16 89.7 146 47.3
CANSAT64G1261 Cannabis sativa HOM05D008548 ORTHO05D010565 1.2e-15 87.0 153 45.8
Lalb_Chr10g0099171 Lupinus albus HOM05D008548 ORTHO05D010565 6.2e-15 84.7 142 43.0
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 1.1e-14 84.0 108 49.1
FAN07G0570 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.8e-14 83.2 146 44.5
Gohir.A03G106700 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.1e-14 82.4 147 46.9
Manes.14G090400 Manihot esculenta HOM05D008548 ORTHO05D010565 3.1e-14 82.4 144 43.1
TWI79G1579 Tripterygium wilfordii HOM05D008548 ORTHO05D010565 6.8e-14 81.3 129 45.0
CiPaw.05G121500 Carya illinoinensis HOM05D008548 ORTHO05D010565 1.5e-13 80.1 142 41.5
Sabra08G0084500 Salix brachista HOM05D008548 ORTHO05D010565 2.0e-13 79.7 123 43.1
Lalb_Chr17g0341471 Lupinus albus HOM05D008548 ORTHO05D010565 1.3e-12 77.0 138 42.0
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 4.9e-12 75.1 96 52.1
Manes.06G079400 Manihot esculenta HOM05D008548 ORTHO05D010565 1.9e-11 73.2 145 43.4
Medtr5g048090 Medicago truncatula HOM05D008548 ORTHO05D010565 9.2e-11 70.9 138 37.7
Rhsim09G0122000 Rhododendron simsii HOM05D008548 ORTHO05D010565 2.1e-10 69.7 127 43.3
Rhsim12G0071200 Rhododendron simsii HOM05D008548 ORTHO05D010565 4.6e-10 68.6 155 40.0
Solyc05g011825.2 Solanum lycopersicum HOM05D008548 ORTHO05D010565 4.6e-10 68.6 95 44.2
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 6.0e-10 68.2 91 44.0
CiPaw.06G095100 Carya illinoinensis HOM05D008548 ORTHO05D010565 7.8e-10 67.8 147 40.1
Cpa.g.sc1.170 Carica papaya HOM05D008548 ORTHO05D010565 1.0e-09 67.4 145 35.9
arahy.Tifrunner.gnm1.ann1.R5LUMW Arachis hypogaea HOM05D008548 ORTHO05D010565 8.6e-09 64.3 120 41.7
Psat2g090800 Pisum sativum HOM05D008548 ORTHO05D010565 1.1e-08 63.9 137 43.1
DCAR_026688 Daucus carota HOM05D008548 ORTHO05D010565 1.5e-08 63.5 140 35.7
THA.LOC104805214 Tarenaya hassleriana HOM05D011384 ORTHO05D013461 1.5e-08 63.5 140 37.9
TPR.G38502 Trifolium pratense HOM05D008548 ORTHO05D010565 1.5e-08 63.5 142 40.8
PGR119G2115 Punica granatum HOM05D008548 ORTHO05D010565 1.9e-08 63.2 126 36.5
PGSC0003DMG400019660 Solanum tuberosum HOM05D008548 ORTHO05D010565 5.6e-08 61.6 44 65.9
Peaxi162Scf00188g01031 Petunia axillaris HOM05D008548 ORTHO05D010565 1.6e-07 60.1 32 84.4
Nn3g17542 Nelumbo nucifera HOM05D008548 ORTHO05D010565 2.1e-07 59.7 139 35.3


User provided reference genes

Program Settings