Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 2.4e-220 768.5 373 100.0
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 1.8e-178 629.4 378 81.7
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 2.8e-176 622.1 323 90.7
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 1.2e-155 553.5 341 78.3
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 2.7e-155 552.4 318 83.3
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 1.4e-154 550.1 320 81.9
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 2.3e-154 549.3 318 82.1
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 3.3e-153 545.4 321 81.0
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 1.3e-152 543.5 320 79.1
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 1.7e-152 543.1 318 81.8
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 2.8e-152 542.3 318 80.8
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 2.8e-152 542.3 321 81.0
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 8.2e-152 540.8 321 80.7
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 3.1e-151 538.9 324 79.3
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 5.3e-151 538.1 323 78.9
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 5.9e-150 534.6 320 80.0
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 2.2e-149 532.7 373 71.0
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 2.2e-149 532.7 321 79.4
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 5.0e-149 531.6 320 78.8
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 8.5e-149 530.8 364 72.8
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 1.9e-148 529.6 332 76.2
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 2.5e-148 529.3 320 80.6
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 3.2e-148 528.9 305 82.6
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 9.4e-148 527.3 350 73.4
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 9.4e-148 527.3 318 76.4
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 1.6e-147 526.6 320 79.1
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 3.6e-147 525.4 321 78.2
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 3.6e-147 525.4 321 79.4
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 6.1e-147 524.6 322 77.6
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 5.2e-146 521.5 321 78.2
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 5.2e-146 521.5 342 74.6
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 3.3e-145 518.8 320 77.8
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.7e-144 516.5 318 77.0
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 4.8e-144 515.0 318 78.0
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 6.3e-144 514.6 324 76.9
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 8.2e-144 514.2 319 76.2
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 1.8e-143 513.1 369 70.5
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 2.4e-143 512.7 320 76.9
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 3.1e-143 512.3 319 75.9
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 7.0e-143 511.1 320 76.6
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 7.0e-143 511.1 320 76.6
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 1.6e-142 510.0 323 75.2
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 2.0e-142 509.6 352 70.2
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 2.0e-142 509.6 318 75.8
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 2.2e-141 506.1 318 75.5
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 3.8e-141 505.4 322 75.5
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 3.8e-141 505.4 318 75.8
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 6.5e-141 504.6 318 74.5
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 6.5e-141 504.6 320 71.2
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 2.5e-140 502.7 318 74.8
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 9.4e-140 500.7 324 71.0
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 1.2e-139 500.4 322 73.9
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 1.6e-139 500.0 322 74.5
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 2.7e-139 499.2 318 73.3
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 4.7e-139 498.4 322 74.5
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 4.7e-139 498.4 322 74.5
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 4.7e-139 498.4 318 73.3
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 4.7e-139 498.4 320 73.1
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 6.1e-139 498.0 318 75.5
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 8.0e-139 497.7 333 71.2
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 8.0e-139 497.7 320 71.9
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 5.2e-138 495.0 370 65.7
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 8.8e-138 494.2 318 73.6
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 1.2e-137 493.8 318 73.9
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 2.0e-137 493.0 327 69.4
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 2.6e-137 492.7 322 73.6
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 2.6e-137 492.7 322 73.0
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 3.3e-137 492.3 318 74.5
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 4.4e-137 491.9 334 70.4
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 7.5e-137 491.1 318 73.9
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 1.3e-136 490.3 318 70.4
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 1.7e-136 490.0 320 72.5
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 2.8e-136 489.2 322 73.3
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 4.8e-136 488.4 318 74.5
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 1.1e-135 487.3 322 70.8
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 1.4e-135 486.9 425 61.4
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.4e-135 486.9 318 70.1
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 2.4e-135 486.1 370 67.0
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 3.1e-135 485.7 319 72.4
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 4.1e-135 485.3 318 71.1
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 4.1e-135 485.3 318 72.6
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 5.3e-135 485.0 318 73.9
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 5.3e-135 485.0 320 71.9
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 5.3e-135 485.0 319 72.1
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 7.0e-135 484.6 370 66.8
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 2.0e-134 483.0 319 72.4
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 2.7e-134 482.6 353 65.2
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 4.5e-134 481.9 319 71.2
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 5.9e-134 481.5 315 70.2
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 7.7e-134 481.1 370 66.5
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.0e-133 480.7 318 71.1
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.9e-133 479.2 321 70.1
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 6.5e-133 478.0 318 70.4
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 8.5e-133 477.6 318 71.1
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 1.5e-132 476.9 321 70.4
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 3.2e-132 475.7 318 71.7
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 4.2e-132 475.3 320 70.9
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 4.2e-132 475.3 318 69.5
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 4.2e-132 475.3 318 69.5
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 7.2e-132 474.6 339 67.8
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 1.0e-130 470.7 325 68.3
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 3.0e-130 469.2 320 69.1
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 8.8e-130 467.6 318 71.1
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 8.8e-130 467.6 320 68.8
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 4.4e-129 465.3 303 75.2
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 4.4e-129 465.3 310 71.3
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 5.7e-129 464.9 321 68.5
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 8.3e-128 461.1 320 67.8
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 1.3e-125 453.8 320 70.6
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 1.1e-124 450.7 318 66.7
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 1.5e-124 450.3 318 69.5
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 1.5e-124 450.3 331 65.0
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.9e-124 449.9 322 68.3
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 1.9e-124 449.9 323 66.3
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 2.5e-124 449.5 392 57.7
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 3.6e-123 445.7 295 69.5
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 5.7e-121 438.3 322 68.3
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 8.3e-120 434.5 318 64.8
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 1.2e-118 430.6 318 64.2
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 1.6e-118 430.3 339 61.7
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 2.0e-118 429.9 318 64.8
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 2.7e-118 429.5 332 62.0
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 7.8e-118 427.9 305 68.2
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 3.8e-117 425.6 286 70.3
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 6.1e-115 418.3 285 68.8
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 3.4e-113 412.5 292 68.8
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 5.7e-113 411.8 318 63.2
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 1.1e-111 407.5 324 64.2
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 3.9e-109 399.1 340 58.2
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 1.8e-106 390.2 336 58.3
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 1.7e-104 383.6 325 58.2
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 3.0e-101 372.9 320 56.9
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 6.6e-101 371.7 320 56.9
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 1.4e-98 364.0 320 57.5
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 6.4e-96 355.1 320 55.3
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 6.4e-96 355.1 295 60.3
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 1.1e-95 354.4 228 75.0
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 3.0e-93 346.3 203 82.8
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 8.1e-91 338.2 246 67.5
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 2.2e-88 330.1 356 47.5
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 2.2e-80 303.5 187 78.6
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 4.8e-75 285.8 218 60.1
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.9e-71 273.9 185 71.9
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 3.1e-66 256.5 192 68.2
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 1.3e-61 241.1 167 69.5
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 6.7e-61 238.8 308 46.8
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 1.1e-60 238.0 153 75.8
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 8.4e-56 221.9 140 70.7
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 3.3e-52 209.9 147 69.4
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 1.1e-44 184.9 147 57.8
MD05G1127700 Malus domestica HOM05D004085 ORTHO05D005189 1.4e-39 167.9 93 84.9
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 4.2e-39 166.4 94 79.8
HPP92_003722 Vanilla planifolia HOM05D004085 ORTHO05D005189 7.9e-38 162.2 124 62.9
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 1.0e-37 161.8 132 59.8
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 1.4e-34 151.4 93 77.4
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 2.6e-33 147.1 113 62.8
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 2.6e-28 130.6 105 65.7
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 2.2e-27 127.5 69 81.2
Thecc.03G108100 Theobroma cacao HOM05D004085 ORTHO05D026373 8.2e-27 125.6 86 66.3
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 3.5e-25 120.2 169 42.0
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 1.0e-24 118.6 75 66.7
Actinidia04797 Actinidia chinensis HOM05D004085 ORTHO05D026373 6.5e-24 115.9 74 71.6
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 2.1e-22 110.9 67 70.1
SEGI_34269 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 1.3e-19 101.7 57 73.7
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 6.5e-16 89.4 74 62.2
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 1.7e-11 74.7 43 79.1
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 4.5e-09 66.6 51 62.7
Eucgr.B03119 Eucalyptus grandis HOM05D004085 ORTHO05D195170 2.5e-07 60.8 56 55.4
HPP92_003723 Vanilla planifolia HOM05D004085 ORTHO05D005189 3.3e-07 60.5 82 47.6
BolC7t43945H Brassica oleracea HOM05D004085 ORTHO05D005189 4.7e-06 56.6 44 65.9


User provided reference genes

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