Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 0.0e+00 1705.3 963 100.0
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 0.0e+00 1288.1 979 76.4
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 0.0e+00 1092.8 972 69.0
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 0.0e+00 1078.2 967 68.7
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 0.0e+00 1075.1 966 69.5
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 9.4e-309 1063.5 994 63.8
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.6e-308 1062.8 968 66.7
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 4.2e-301 1038.1 967 67.8
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 6.1e-300 1034.2 983 62.7
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 8.0e-292 1007.3 857 70.8
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 4.4e-290 1001.5 990 61.8
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 2.8e-289 998.8 916 62.7
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 5.9e-287 991.1 991 62.9
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 1.5e-285 986.5 995 61.4
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 9.5e-285 983.8 986 60.1
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.8e-284 982.2 985 59.9
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.4e-283 979.9 987 60.3
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.2e-281 972.6 967 63.0
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 1.1e-277 960.3 990 59.5
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 1.0e-275 953.7 976 61.1
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.4e-275 953.4 980 59.4
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 8.9e-275 950.7 922 61.1
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 9.8e-274 947.2 986 59.7
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 2.9e-273 945.7 903 63.2
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 5.4e-272 941.4 909 62.3
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 9.5e-269 930.6 984 59.3
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 3.7e-265 918.7 992 57.9
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 5.4e-264 914.8 918 60.0
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 1.3e-262 910.2 997 58.1
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 1.5e-261 906.7 921 60.2
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 4.9e-257 891.7 915 60.0
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 2.4e-256 889.4 921 59.3
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.1e-256 888.6 977 56.1
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 3.5e-255 885.6 986 57.9
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 7.8e-255 884.4 983 56.8
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 3.9e-254 882.1 1104 51.9
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 8.9e-251 870.9 942 57.6
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 6.4e-249 864.8 990 57.5
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 9.3e-248 860.9 979 54.3
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.6e-247 860.1 974 55.5
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 2.1e-247 859.8 922 57.5
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.1e-245 854.0 942 55.3
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 3.1e-243 845.9 977 55.5
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 9.0e-243 844.3 928 57.7
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.2e-242 844.0 979 53.0
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 4.4e-242 842.0 991 55.3
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 9.9e-242 840.9 901 56.6
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.3e-241 840.5 987 54.7
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 2.2e-241 839.7 901 56.8
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 2.2e-241 839.7 925 57.3
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 1.4e-240 837.0 927 57.0
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 1.9e-240 836.6 907 56.3
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 1.2e-239 833.9 971 53.9
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 1.6e-239 833.6 977 53.6
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 7.8e-239 831.2 906 55.1
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.3e-238 830.5 924 56.0
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 1.7e-238 830.1 934 56.6
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 6.6e-238 828.2 1009 53.1
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 1.5e-237 827.0 1017 51.6
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 2.5e-237 826.2 906 56.5
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 4.3e-237 825.5 901 56.2
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 9.6e-237 824.3 965 54.3
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 1.3e-236 823.9 937 56.4
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.6e-236 823.5 1003 53.0
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 4.8e-236 822.0 888 56.4
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 4.8e-236 822.0 986 52.8
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 8.1e-236 821.2 931 55.3
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 2.6e-234 816.2 915 54.8
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 5.8e-234 815.1 908 56.9
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 9.9e-234 814.3 981 53.2
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 1.3e-233 813.9 904 55.9
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 1.9e-232 810.1 905 55.9
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 1.9e-232 810.1 1012 51.9
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.8e-230 803.5 911 55.9
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.1e-229 800.8 923 55.5
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.5e-229 800.4 847 58.0
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 5.6e-229 798.5 981 52.6
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 9.6e-229 797.7 916 54.8
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 1.2e-226 790.8 910 52.2
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 3.4e-226 789.3 988 54.0
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 2.9e-225 786.2 915 56.0
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 1.6e-223 780.4 980 53.6
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 1.0e-222 777.7 946 54.8
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.8e-222 776.9 992 51.7
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.6e-220 770.4 909 52.4
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.6e-220 770.4 984 51.1
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 3.7e-220 769.2 987 51.0
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 6.5e-217 758.4 992 51.4
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 1.8e-211 740.3 900 51.9
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 4.1e-211 739.2 1000 49.6
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 1.4e-208 730.7 921 50.2
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 2.5e-205 719.9 907 50.6
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 2.5e-200 703.4 879 50.5
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 2.5e-192 676.8 896 49.0
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 1.8e-166 590.9 443 66.8
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 5.7e-165 585.9 990 42.1
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 2.9e-156 557.0 687 52.7
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 2.7e-154 550.4 936 41.0
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 2.3e-153 547.4 922 42.1
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 5.6e-152 542.7 394 70.6
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 4.8e-127 459.9 575 52.5
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.0e-125 454.5 657 52.8
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.2e-124 451.1 622 47.9
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 8.1e-111 406.0 942 37.5
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 4.0e-110 403.7 518 55.8
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 5.3e-94 350.1 264 68.6
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 2.6e-93 347.8 620 42.1
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.3e-88 330.5 488 48.2
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.2e-68 265.0 322 59.3
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 3.8e-68 264.2 261 53.6
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 3.7e-63 247.7 267 50.6
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 3.1e-62 244.6 346 50.3
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 5.7e-56 223.8 312 50.6
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 6.3e-55 220.3 192 59.4
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-53 216.1 402 44.3
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 3.3e-51 208.0 295 50.5
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 3.3e-51 208.0 337 44.5
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 3.6e-50 204.5 941 27.2
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.9e-43 182.2 282 46.5
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 4.0e-33 147.9 1097 24.6
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 2.4e-30 138.7 329 41.6
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 3.9e-28 131.3 664 25.3
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 6.2e-26 124.0 99 64.6
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 8.9e-25 120.2 789 25.2
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.4e-24 117.9 124 55.6
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 4.9e-23 114.4 114 57.0
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 8.4e-23 113.6 119 53.8
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 1.1e-22 113.2 72 87.5
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 3.2e-22 111.7 110 57.3
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 7.1e-22 110.5 344 35.2
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 9.2e-22 110.2 118 57.6
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.6e-21 109.4 91 67.0
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.7e-20 105.9 122 55.7
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 2.5e-19 102.1 92 59.8
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.3e-19 101.3 116 51.7
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 1.2e-18 99.8 92 59.8
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 4.0e-17 94.7 214 36.0
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.7e-15 89.4 78 62.8
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 3.2e-14 85.1 204 31.4
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.6e-13 81.3 69 68.1
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 4.6e-13 81.3 58 70.7
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.1e-10 72.4 57 68.4
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.8e-09 69.3 57 66.7
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 7.6e-08 63.9 57 64.9
Dinv34035 Davidia involucrata HOM05D004844 ORTHO05D006036 7.6e-08 63.9 192 31.2
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 8.4e-07 60.5 52 67.3
AagrBONN_evm.TU.Sc2ySwM_228.4285 Anthoceros agrestis HOM05D004844 ORTHO05D074214 5.4e-06 57.8 89 41.6


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