Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.3e-44 184.1 245 100.0
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 5.8e-29 132.1 243 88.5
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.6e-26 124.0 243 88.1
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 4.3e-24 115.9 120 57.5
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 7.3e-24 115.2 122 72.1
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 2.8e-23 113.2 122 71.3
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 8.1e-23 111.7 123 67.5
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.4e-22 110.2 124 67.7
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.2e-21 107.8 122 53.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.2e-21 107.8 121 64.5
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.0e-21 107.1 122 62.3
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.0e-21 107.1 122 64.8
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 9.9e-21 104.8 122 64.8
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.7e-20 104.0 113 69.0
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.7e-20 104.0 122 60.7
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 2.2e-20 103.6 125 65.6
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 2.2e-20 103.6 112 68.8
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 3.8e-20 102.8 121 66.1
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 4.9e-20 102.4 121 52.1
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 4.9e-20 102.4 124 61.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 4.9e-20 102.4 112 76.8
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 4.9e-20 102.4 115 53.0
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 8.4e-20 101.7 110 61.8
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.4e-19 100.9 146 47.3
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 2.4e-19 100.1 112 66.1
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 3.2e-19 99.8 120 49.2
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 3.2e-19 99.8 120 64.2
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 4.1e-19 99.4 122 60.7
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 5.4e-19 99.0 112 55.4
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 5.4e-19 99.0 119 63.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 9.2e-19 98.2 121 49.6
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 120 51.7
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.6e-18 97.4 121 50.4
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.7e-18 96.7 124 48.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.7e-18 96.7 120 50.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 2.7e-18 96.7 85 65.9
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 3.5e-18 96.3 122 63.9
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 4.6e-18 95.9 117 53.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 6.0e-18 95.5 125 64.0
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 6.0e-18 95.5 122 63.1
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 6.0e-18 95.5 122 45.9
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.0e-17 94.7 119 47.1
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.3e-17 94.4 121 46.3
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.3e-17 93.6 107 53.3
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 2.3e-17 93.6 120 65.8
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 3.0e-17 93.2 123 55.3
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 3.9e-17 92.8 121 66.1
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.9e-17 92.8 107 70.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 5.1e-17 92.4 117 49.6
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 6.6e-17 92.0 121 56.2
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.6e-17 92.0 107 70.1
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 6.6e-17 92.0 121 62.8
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.1e-16 91.3 115 59.1
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.1e-16 91.3 117 63.2
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.5e-16 90.9 114 61.4
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.5e-16 90.9 105 69.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.9e-16 90.5 105 69.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.9e-16 90.5 120 66.7
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 2.5e-16 90.1 121 66.9
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 3.3e-16 89.7 111 68.5
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 3.3e-16 89.7 122 63.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 4.3e-16 89.4 116 47.4
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 4.3e-16 89.4 114 59.6
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 9.6e-16 88.2 115 44.3
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 9.6e-16 88.2 115 44.3
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 9.6e-16 88.2 115 44.3
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.2e-15 87.8 113 66.4
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 2.1e-15 87.0 117 62.4
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 2.1e-15 87.0 115 58.3
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 2.1e-15 87.0 82 59.8
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 2.8e-15 86.7 116 47.4
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 3.6e-15 86.3 116 62.1
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.4e-14 84.3 121 60.3
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.4e-14 84.3 85 58.8
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 3.1e-14 83.2 116 57.8
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 3.1e-14 83.2 116 56.9
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 3.1e-14 83.2 116 59.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.0e-14 82.8 88 54.5
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.9e-14 82.0 88 54.5
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 6.9e-14 82.0 115 63.5
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.0e-14 81.6 88 54.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.0e-14 81.6 88 54.5
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 9.0e-14 81.6 122 57.4
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.2e-13 81.3 116 56.0
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.5e-13 80.9 98 62.2
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.0e-13 80.5 95 62.1
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.0e-13 80.5 114 63.2
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 4.4e-13 79.3 122 53.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 5.8e-13 79.0 81 51.9
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 2.2e-12 77.0 81 51.9
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 2.2e-12 77.0 115 42.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 2.9e-12 76.6 82 53.7
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 3.8e-12 76.3 120 59.2
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.1e-11 74.7 110 60.0
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 4.2e-11 72.8 77 53.2
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 2.1e-10 70.5 67 52.2
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.3e-09 67.8 85 47.1
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.0e-09 66.6 88 50.0
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 8.7e-09 65.1 116 40.5
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.1e-08 64.7 122 51.6
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 4.3e-08 62.8 114 40.4
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 7.3e-08 62.0 84 47.6
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 7.3e-08 62.0 46 67.4
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 9.6e-08 61.6 107 35.5
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 4.8e-07 59.3 72 51.4
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 3.1e-06 56.6 73 42.5


User provided reference genes

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