Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G281100 Prunus persica HOM05D004550 ORTHO05D005340 2.3e-117 425.6 224 100.0
RcHm_v2.0_Chr4g0438981 Rosa chinensis HOM05D004550 ORTHO05D005340 1.0e-96 357.1 223 83.4
FAN17G0531 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.1e-95 353.6 223 81.6
FvH4_4g30590 Fragaria vesca HOM05D004550 ORTHO05D005340 5.5e-95 351.3 223 81.2
FAN07G0354 Fragaria x ananassa HOM05D004550 ORTHO05D005340 2.3e-93 345.9 223 79.8
FAN12G3802 Fragaria x ananassa HOM05D004550 ORTHO05D005340 9.2e-90 334.0 215 80.9
FAN22G1576 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.0e-88 330.5 222 77.5
QL03p070023 Quercus lobata HOM05D004550 ORTHO05D005340 8.0e-86 320.9 226 75.2
CiPaw.06G089400 Carya illinoinensis HOM05D004550 ORTHO05D005340 1.2e-84 317.0 227 74.4
Atru.chr11.1702 Acer truncatum HOM05D004550 ORTHO05D005340 5.7e-84 314.7 226 73.9
Manes.05G107100 Manihot esculenta HOM05D004550 ORTHO05D005340 1.8e-82 309.7 228 71.5
Ciclev10032704m.g Citrus clementina HOM05D004550 ORTHO05D005340 7.0e-82 307.8 225 72.9
TWI31G0520 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 1.3e-80 303.5 224 69.6
CiPaw.05G128700 Carya illinoinensis HOM05D004550 ORTHO05D005340 1.7e-80 303.1 227 71.8
Cfa008917 Carpinus fangiana HOM05D004550 ORTHO05D005340 3.0e-80 302.4 226 72.1
CsaV3_5G025150 Cucumis sativus L. HOM05D004550 ORTHO05D005340 3.0e-80 302.4 227 70.9
CSS0021997 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 2.5e-79 299.3 226 69.5
Dinv34106 Davidia involucrata HOM05D004550 ORTHO05D005340 9.5e-79 297.4 224 70.5
TAR629G0577 Trochodendron aralioides HOM05D004550 ORTHO05D005340 9.5e-79 297.4 225 69.8
ClCG09G021950 Citrullus lanatus HOM05D004550 ORTHO05D005340 1.6e-78 296.6 227 68.7
CSS0045485 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 2.1e-78 296.2 226 69.0
Hma1.2p1_0354F.1_g133690 Hydrangea macrophylla HOM05D004550 ORTHO05D005340 2.1e-78 296.2 224 69.2
Thecc.02G338200 Theobroma cacao HOM05D004550 ORTHO05D005340 3.6e-78 295.4 227 69.2
Duzib268G1083 Durio zibethinus HOM05D004550 ORTHO05D005340 4.7e-78 295.0 226 69.0
Rhsim12G0077600 Rhododendron simsii HOM05D004550 ORTHO05D005340 6.2e-78 294.7 227 68.7
Eucgr.B03186 Eucalyptus grandis HOM05D004550 ORTHO05D005340 8.0e-78 294.3 228 71.1
Gohir.D12G165500 Gossypium hirsutum HOM05D004550 ORTHO05D005340 1.0e-77 293.9 226 67.7
Gorai.008G178200 Gossypium raimondii HOM05D004550 ORTHO05D005340 1.0e-77 293.9 226 67.7
Gohir.A12G162200 Gossypium hirsutum HOM05D004550 ORTHO05D005340 1.2e-76 290.4 226 66.8
Potri.010G162600 Populus trichocarpa HOM05D004550 ORTHO05D005340 2.0e-76 289.7 228 68.4
TWI79G1514 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 4.4e-76 288.5 226 69.5
MELO3C002974.2 Cucumis melo HOM05D004550 ORTHO05D005340 7.5e-76 287.7 257 62.6
GSVIVG01001334001 Vitis vinifera HOM05D004550 ORTHO05D005340 2.2e-75 286.2 227 70.0
PGR102G3210 Punica granatum HOM05D004550 ORTHO05D005340 4.9e-75 285.0 228 68.4
Sed0017620 Sechium edule HOM05D004550 ORTHO05D005340 6.4e-75 284.6 227 66.5
Potri.008G092300 Populus trichocarpa HOM05D004550 ORTHO05D005340 8.3e-75 284.3 227 67.8
Nitab4.5_0000334g0090 Nicotiana tabacum HOM05D004550 ORTHO05D005340 1.4e-74 283.5 227 67.4
PGSC0003DMG400028333 Solanum tuberosum HOM05D004550 ORTHO05D005340 7.0e-74 281.2 226 65.0
Nitab4.5_0011843g0010 Nicotiana tabacum HOM05D004550 ORTHO05D005340 2.0e-73 279.6 227 66.5
Duzib251G0963 Durio zibethinus HOM05D004550 ORTHO05D005340 2.7e-73 279.3 224 67.9
Solyc05g012710.4 Solanum lycopersicum HOM05D004550 ORTHO05D005340 2.7e-73 279.3 226 64.2
Sopen05g007540 Solanum pennellii HOM05D004550 ORTHO05D005340 7.8e-73 277.7 226 63.7
CAN.G1200.3 Capsicum annuum HOM05D004550 ORTHO05D005340 1.0e-72 277.3 226 64.2
Cc11_g12470 Coffea canephora HOM05D004550 ORTHO05D005340 2.3e-72 276.2 227 66.1
Cpa.g.sc1.80 Carica papaya HOM05D004550 ORTHO05D005340 3.9e-72 275.4 197 75.1
Migut.L01230 Erythranthe guttata HOM05D004550 ORTHO05D005340 3.9e-72 275.4 227 66.1
Phvul.002G090800 Phaseolus vulgaris HOM05D004550 ORTHO05D005340 8.6e-72 274.2 231 65.4
Lalb_Chr17g0340931 Lupinus albus HOM05D004550 ORTHO05D005340 1.5e-71 273.5 231 67.1
vmacro01339 Vaccinium macrocarpon HOM05D004550 ORTHO05D005340 1.9e-71 273.1 201 71.1
arahy.Tifrunner.gnm1.ann1.M1L69X Arachis hypogaea HOM05D004550 ORTHO05D005340 2.5e-71 272.7 230 67.0
DCAR_030983 Daucus carota HOM05D004550 ORTHO05D005340 3.3e-71 272.3 226 64.2
Glyma.02G112600 Glycine max HOM05D004550 ORTHO05D005340 4.3e-71 271.9 229 65.9
Glyma.01G054200 Glycine max HOM05D004550 ORTHO05D005340 7.3e-71 271.2 229 66.4
VMungo1215G2831 Vigna mungo HOM05D004550 ORTHO05D005340 7.3e-71 271.2 231 65.8
COL.COLO4_27949 Corchorus olitorius HOM05D004550 ORTHO05D005340 9.5e-71 270.8 198 72.2
Nn3g17356 Nelumbo nucifera HOM05D004550 ORTHO05D005340 1.6e-70 270.0 226 65.5
Actinidia31956 Actinidia chinensis HOM05D004550 ORTHO05D005340 2.1e-70 269.6 227 65.2
Medtr5g043020 Medicago truncatula HOM05D004550 ORTHO05D005340 2.8e-70 269.2 228 65.4
Sabra08G0069100 Salix brachista HOM05D004550 ORTHO05D005340 3.6e-70 268.9 277 57.8
CARHR062270 Cardamine hirsuta HOM05D004550 ORTHO05D005340 4.7e-70 268.5 225 67.6
Nn4g23307 Nelumbo nucifera HOM05D004550 ORTHO05D005340 4.7e-70 268.5 227 66.1
Aqoxy3G03523 Aquilegia oxysepala HOM05D004550 ORTHO05D005340 8.1e-70 267.7 230 64.3
Thhalv10019103m.g Eutrema salsugineum HOM05D004550 ORTHO05D005340 1.8e-69 266.5 229 65.5
Lj2g0016497 Lotus japonicus HOM05D004550 ORTHO05D005340 3.1e-69 265.8 229 65.9
Peaxi162Scf00364g00223 Petunia axillaris HOM05D004550 ORTHO05D005340 1.2e-68 263.8 222 62.6
Ca_27938_v3 Cicer arietinum L. HOM05D004550 ORTHO05D005340 2.0e-68 263.1 228 66.2
Haze_11945 Corylus avellana HOM05D004550 ORTHO05D005340 3.4e-68 262.3 179 76.0
Sp5g24440 Schrenkiella parvula HOM05D004550 ORTHO05D005340 3.4e-68 262.3 228 64.9
MSTRG.7770 Avicennia marina HOM05D004550 ORTHO05D005340 9.8e-68 260.8 227 62.6
CANSAT64G2188 Cannabis sativa HOM05D004550 ORTHO05D005340 4.9e-67 258.5 231 61.9
Sabra10G0123800 Salix brachista HOM05D001252 ORTHO05D005340 6.4e-67 258.1 199 68.3
BolC2t08705H Brassica oleracea HOM05D004550 ORTHO05D005340 1.4e-66 256.9 229 65.1
arahy.Tifrunner.gnm1.ann1.F9ESEJ Arachis hypogaea HOM05D004550 ORTHO05D005340 2.4e-66 256.1 219 66.2
AL2G28500 Arabidopsis lyrata HOM05D004550 ORTHO05D005340 3.2e-66 255.8 227 63.9
Carub.0002s1599 Capsella rubella HOM05D004550 ORTHO05D005340 3.2e-66 255.8 226 64.2
THA.LOC104822027 Tarenaya hassleriana HOM05D004550 ORTHO05D005340 3.2e-66 255.8 227 66.1
AT1G69390 Arabidopsis thaliana HOM05D004550 ORTHO05D005340 5.4e-66 255.0 227 63.9
Manes.05G087100 Manihot esculenta HOM05D004550 ORTHO05D005340 5.4e-66 255.0 172 77.3
C02p26330 Brassica napus HOM05D004550 ORTHO05D005340 2.1e-65 253.1 229 64.2
BcaB05g24446 Brassica carinata HOM05D004550 ORTHO05D005340 3.5e-65 252.3 229 64.2
Psat2g127440 Pisum sativum HOM05D004550 ORTHO05D005340 4.6e-65 251.9 228 62.3
Sc04g0007790 Simmondsia chinensis HOM05D004550 ORTHO05D005340 7.8e-65 251.1 228 61.8
BolC6t39378H Brassica oleracea HOM05D004550 ORTHO05D005340 1.0e-64 250.8 226 62.4
TPR.G30749 Trifolium pratense HOM05D004550 ORTHO05D005340 1.0e-64 250.8 223 64.1
DCAR_007179 Daucus carota HOM05D004550 ORTHO05D005340 2.3e-64 249.6 226 59.3
PSO063G6186 Papaver somniferum HOM05D004550 ORTHO05D005340 2.3e-64 249.6 230 60.0
Lalb_Chr04g0255821 Lupinus albus HOM05D004550 ORTHO05D005340 5.1e-64 248.4 230 62.6
PSO063G5570 Papaver somniferum HOM05D004550 ORTHO05D005340 5.1e-64 248.4 230 59.6
Aa31LG4G11470 Aethionema arabicum HOM05D004550 ORTHO05D005340 8.6e-64 247.7 219 65.3
A07p35690 Brassica napus HOM05D004550 ORTHO05D005340 1.1e-63 247.3 226 62.4
BraA07t31157Z Brassica rapa HOM05D004550 ORTHO05D005340 1.1e-63 247.3 226 62.4
MBI19_g03106_MAGBIO Magnolia biondii HOM05D004550 ORTHO05D005340 1.5e-63 246.9 228 61.4
TAR371G1135 Trochodendron aralioides HOM05D004550 ORTHO05D005340 1.9e-63 246.5 178 73.0
C06p40530 Brassica napus HOM05D004550 ORTHO05D005340 2.5e-63 246.1 227 62.1
Lsat_1_v5_gn_8_46800 Lactuca sativa HOM05D004550 ORTHO05D005340 2.5e-63 246.1 228 59.6
SGA_v2.0_scaffold36G14423 Striga asiatica HOM05D004550 ORTHO05D005340 7.3e-63 244.6 230 60.9
HanXRQChr12g0362721 Helianthus annuus HOM05D004550 ORTHO05D005340 2.1e-62 243.0 226 59.7
SGA_v2.0_scaffold16G07747 Striga asiatica HOM05D004550 ORTHO05D005340 2.8e-62 242.7 231 60.6
Actinidia19927 Actinidia chinensis HOM05D004550 ORTHO05D005340 6.2e-62 241.5 198 66.2
unitig_21.g20859 Utricularia gibba HOM05D004550 ORTHO05D005340 6.2e-62 241.5 228 60.1
ECA233G5814 Erigeron canadensis HOM05D004550 ORTHO05D005340 1.1e-61 240.7 219 61.2
Ah.02g129300 Amaranthus hybridus HOM05D004550 ORTHO05D005340 1.8e-61 240.0 247 58.3
GSVIVG01011473001 Vitis vinifera HOM05D004550 ORTHO05D005340 5.2e-61 238.4 229 59.0
EL10Ac6g13282 Beta vulgaris HOM05D004550 ORTHO05D005340 1.5e-60 236.9 259 54.4
BcaB03g15897 Brassica carinata HOM05D004550 ORTHO05D005340 1.5e-60 236.9 230 60.4
TAR374G1091 Trochodendron aralioides HOM05D004550 ORTHO05D005340 3.4e-60 235.7 176 70.5
Oeu021093.1 Olea europaea HOM05D004550 ORTHO05D005340 4.4e-60 235.3 171 71.3
Hund05856 Selenicereus undatus HOM05D004550 ORTHO05D005340 1.3e-59 233.8 226 59.3
Ah.03g134600 Amaranthus hybridus HOM05D004550 ORTHO05D005340 2.9e-59 232.6 228 59.6
A02p15870 Brassica napus HOM05D004550 ORTHO05D005340 3.7e-59 232.3 198 63.6
FvH4_6g47773 Fragaria vesca HOM05D004550 ORTHO05D005340 6.4e-59 231.5 228 59.6
HanXRQChr08g0210541 Helianthus annuus HOM05D004550 ORTHO05D005340 6.4e-59 231.5 225 59.6
HanXRQChr08g0211031 Helianthus annuus HOM05D004550 ORTHO05D005340 6.4e-59 231.5 225 59.6
BcaC03g15080 Brassica carinata HOM05D004550 ORTHO05D005340 9.2e-58 227.6 174 71.8
RcHm_v2.0_Chr2g0166971 Rosa chinensis HOM05D004550 ORTHO05D005340 1.6e-57 226.9 234 58.5
FAN05G1708 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.0e-56 224.2 225 59.6
FAN14G0263 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.3e-56 223.8 172 67.4
Gohir.D02G127801 Gossypium hirsutum HOM05D004550 ORTHO05D005340 3.0e-56 222.6 226 56.2
Gorai.005G143600 Gossypium raimondii HOM05D004550 ORTHO05D005340 3.0e-56 222.6 226 56.2
PSO478G0019 Papaver somniferum HOM05D004550 ORTHO05D005340 1.6e-54 216.9 225 56.0
ATR0730G201 Amborella trichopoda HOM05D004550 ORTHO05D005340 2.4e-53 213.0 178 65.7
CDE04G2021 Ceratophyllum demersum HOM05D004550 ORTHO05D005340 2.0e-52 209.9 245 51.4
HanXRQChr17g0545411 Helianthus annuus HOM05D004550 ORTHO05D005340 2.0e-52 209.9 225 56.0
AUR62005866 Chenopodium quinoa HOM05D004550 ORTHO05D005340 3.4e-52 209.1 229 55.5
HPP92_018458 Vanilla planifolia HOM05D004550 ORTHO05D005340 7.6e-52 208.0 233 54.5
Prupe.3G261900 Prunus persica HOM05D004550 ORTHO05D005340 1.3e-51 207.2 215 57.2
Os12g0498400 Oryza sativa ssp. japonica HOM05D004550 ORTHO05D005340 1.1e-50 204.1 207 57.5
MELO3C012132.2 Cucumis melo HOM05D004550 ORTHO05D005340 1.6e-49 200.3 226 52.7
AUR62032858 Chenopodium quinoa HOM05D004550 ORTHO05D005340 2.7e-49 199.5 229 53.7
MSTRG.729 Avicennia marina HOM05D004550 ORTHO05D005340 4.6e-49 198.7 132 73.5
CsaV3_5G033110 Cucumis sativus L. HOM05D004550 ORTHO05D005340 1.9e-47 193.4 226 51.3
MD16G1066100 Malus domestica HOM05D004550 ORTHO05D005340 1.9e-47 193.4 100 98.0
MD09G1057200 Malus domestica HOM05D004550 ORTHO05D005340 1.6e-46 190.3 217 54.8
Potri.004G121000 Populus trichocarpa HOM05D004550 ORTHO05D005340 2.0e-44 183.3 181 58.0
Sabra04G0067200 Salix brachista HOM05D004550 ORTHO05D005340 2.0e-44 183.3 178 57.3
Zm00001eb409620 Zea mays HOM05D004550 ORTHO05D005340 1.3e-43 180.6 126 70.6
Sed0010995 Sechium edule HOM05D004550 ORTHO05D005340 8.4e-43 177.9 227 49.3
SEGI_17925 Sequoiadendron giganteum HOM05D004550 ORTHO05D005340 2.1e-41 173.3 156 61.5
ClCG05G023910 Citrullus lanatus HOM05D004550 ORTHO05D005340 1.0e-40 171.0 211 51.2
Thecc.02G337600 Theobroma cacao HOM05D004550 ORTHO05D005340 6.2e-38 161.8 109 76.1
Actinidia33237 Actinidia chinensis HOM05D004550 ORTHO05D005340 8.1e-38 161.4 150 62.0
Mapoly0021s0017 Marchantia polymorpha HOM05D004550 ORTHO05D005340 4.6e-33 145.6 101 76.2
Pp3c23_20800 Physcomitrium patens HOM05D004550 ORTHO05D005340 8.7e-32 141.4 153 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2821 Anthoceros agrestis HOM05D004550 ORTHO05D005340 3.3e-31 139.4 133 58.6
Pp3c20_5010 Physcomitrium patens HOM05D004550 ORTHO05D005340 3.3e-31 139.4 178 50.6
SMO141G0150 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 1.1e-29 134.4 122 54.9
SMO356G0701 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 4.5e-28 129.0 175 48.0
Pp3c9_20530 Physcomitrium patens HOM05D004550 ORTHO05D005340 5.8e-28 128.6 145 47.6
arahy.Tifrunner.gnm1.ann1.QAIU0T Arachis hypogaea HOM05D004550 ORTHO05D005340 9.3e-26 121.3 75 80.0
BcaC08g45895 Brassica carinata HOM05D004550 ORTHO05D005340 9.6e-23 111.3 71 80.3
BcaB03g15467 Brassica carinata HOM05D004550 ORTHO05D005340 5.0e-19 99.0 64 79.7
C06p37000 Brassica napus HOM05D004550 ORTHO05D005340 1.1e-18 97.8 95 61.1
BolC6t38810H Brassica oleracea HOM05D004550 ORTHO05D005340 1.1e-18 97.8 95 61.1
Potri.017G088401 Populus trichocarpa HOM05D004550 ORTHO05D005340 1.3e-14 84.3 58 69.0
RcHm_v2.0_Chr5g0013451 Rosa chinensis HOM05D004550 ORTHO05D005340 1.6e-14 84.0 68 66.2
PRCOL_00005365 Prasinoderma coloniale HOM05D004550 ORTHO05D005340 1.8e-13 80.5 105 38.1
Cre17.g720350 Chlamydomonas reinhardtii HOM05D004550 ORTHO05D005340 4.1e-13 79.3 108 38.9
MCO05G609 Micromonas commoda HOM05D004550 ORTHO05D005340 6.9e-13 78.6 105 41.0


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