Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 1.4e-78 296.2 152 100.0
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 2.3e-68 262.3 152 88.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 3.0e-68 261.9 153 89.5
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 5.1e-68 261.2 153 90.2
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 3.7e-66 255.0 152 84.2
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 6.3e-66 254.2 152 84.2
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 6.3e-66 254.2 152 82.2
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 1.4e-65 253.1 152 84.2
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.4e-65 253.1 151 84.8
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.4e-65 252.3 152 86.2
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 3.1e-65 251.9 152 83.6
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 5.3e-65 251.1 152 82.2
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 5.3e-65 251.1 152 83.6
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 6.9e-65 250.8 152 83.6
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 9.0e-65 250.4 152 84.2
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 2.6e-64 248.8 152 83.6
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 5.9e-64 247.7 152 83.6
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.0e-63 246.9 152 82.2
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.3e-63 246.5 147 84.4
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 1.7e-63 246.1 151 82.8
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.9e-63 245.4 152 80.9
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 2.9e-63 245.4 152 81.6
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 3.8e-63 245.0 143 86.7
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 5.0e-63 244.6 152 80.9
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 6.5e-63 244.2 152 82.2
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 8.5e-63 243.8 149 83.2
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.1e-62 243.4 152 80.3
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.5e-62 242.3 152 80.9
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 3.2e-62 241.9 152 79.6
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 9.3e-62 240.4 145 82.8
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.2e-61 240.0 145 82.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.1e-61 239.2 151 79.5
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 2.1e-61 239.2 150 80.7
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 3.6e-61 238.4 143 81.8
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 6.1e-61 237.7 152 79.6
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 6.1e-61 237.7 143 83.2
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 6.1e-61 237.7 143 82.5
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 6.1e-61 237.7 152 80.3
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 7.9e-61 237.3 143 82.5
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 1.0e-60 236.9 144 79.9
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.3e-60 236.5 143 82.5
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 5.1e-60 234.6 144 77.8
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.9e-59 232.6 152 76.3
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 3.3e-59 231.9 141 80.9
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.3e-59 231.9 144 79.9
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 7.4e-59 230.7 159 76.1
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 1.3e-58 229.9 141 79.4
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 3.7e-58 228.4 143 79.7
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 4.8e-58 228.0 151 77.5
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.4e-57 226.5 152 77.6
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 3.1e-57 225.3 143 80.4
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 9.0e-57 223.8 143 76.2
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.2e-56 223.4 151 74.8
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.5e-56 223.0 142 81.7
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.0e-56 222.6 144 76.4
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 2.6e-56 222.2 138 80.4
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 5.9e-56 221.1 141 78.7
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 1.0e-55 220.3 138 80.4
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 1.0e-55 220.3 138 78.3
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.7e-55 219.5 146 76.0
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 5.0e-55 218.0 161 70.8
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 6.5e-55 217.6 142 76.8
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 8.5e-55 217.2 141 77.3
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 1.9e-54 216.1 131 82.4
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 3.2e-54 215.3 152 75.7
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 3.2e-54 215.3 129 82.2
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 4.2e-54 214.9 135 76.3
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 4.2e-54 214.9 135 76.3
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.8e-52 209.5 130 81.5
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 6.7e-52 207.6 143 72.7
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.1e-51 206.8 143 75.5
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.5e-51 206.5 143 72.7
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 5.7e-51 204.5 136 73.5
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 6.3e-50 201.1 136 74.3
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.4e-49 199.9 152 65.1
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.1e-49 198.7 190 60.5
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 4.1e-49 198.4 157 63.7
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 5.9e-48 194.5 148 70.3
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 5.9e-48 194.5 142 70.4
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 1.7e-47 193.0 111 86.5
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.0e-47 191.4 132 75.8
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.0e-44 183.7 135 68.9
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 2.0e-43 179.5 152 59.2
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 7.4e-43 177.6 138 63.0
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 7.4e-43 177.6 109 76.1
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 1.7e-42 176.4 110 80.0
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 2.4e-41 172.6 156 58.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 4.1e-41 171.8 152 57.9
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 5.3e-41 171.4 149 58.4
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.2e-40 170.2 138 61.6
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 3.5e-40 168.7 125 68.8
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 4.5e-40 168.3 143 60.1
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 4.5e-40 168.3 149 57.7
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 5.9e-40 167.9 143 60.8
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 5.9e-40 167.9 149 57.7
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.3e-39 166.8 141 63.8
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.7e-39 166.4 149 57.0
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 2.9e-39 165.6 133 61.7
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 3.8e-39 165.2 149 56.4
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 5.0e-39 164.9 149 56.4
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 5.0e-39 164.9 143 58.7
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 3.2e-38 162.2 149 55.0
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 4.2e-38 161.8 149 55.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 4.2e-38 161.8 149 55.7
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 7.2e-38 161.0 111 75.7
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 7.2e-38 161.0 118 69.5
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.8e-36 156.4 116 68.1
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 1.2e-35 153.7 144 50.7
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 4.5e-32 141.7 143 52.4
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 7.7e-32 141.0 141 50.4
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 8.5e-31 137.5 147 57.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 5.2e-28 128.3 77 80.5
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.7e-26 123.2 81 74.1
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 5.9e-24 114.8 65 83.1
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 8.8e-20 100.9 155 43.9
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 2.7e-16 89.4 97 50.5
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 4.5e-16 88.6 119 47.1
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 5.9e-16 88.2 75 60.0
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 3.0e-12 75.9 45 86.7
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 4.6e-08 62.0 138 31.2
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 5.0e-07 58.5 34 85.3
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 5.0e-07 58.5 34 85.3


User provided reference genes

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