Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 4.4e-294 1013.8 498 100.0
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 4.0e-210 734.9 500 77.2
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.0e-198 696.0 490 75.5
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-194 683.7 490 73.3
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 9.8e-193 677.2 490 74.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-191 673.3 491 73.9
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 3.6e-187 658.7 500 67.6
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 3.3e-180 635.6 492 66.5
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.3e-180 635.2 500 65.8
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 3.2e-175 619.0 509 63.9
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.5e-174 615.5 500 65.0
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 6.0e-174 614.8 496 64.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 5.1e-173 611.7 499 65.3
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 2.8e-171 605.9 497 62.2
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.1e-170 602.4 498 63.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 8.9e-170 600.9 448 67.4
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 8.4e-168 594.3 501 64.5
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.1e-167 594.0 499 62.7
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.4e-167 593.6 490 62.7
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 5.4e-167 591.7 500 63.0
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 7.8e-166 587.8 490 62.2
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.7e-165 586.6 500 62.8
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 3.6e-163 578.9 497 59.8
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.9e-160 569.3 489 61.6
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 7.1e-159 564.7 512 59.0
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 3.5e-158 562.4 471 60.7
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.0e-157 560.8 481 60.7
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.0e-157 560.8 503 57.9
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.0e-157 559.3 490 58.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 8.7e-157 557.8 506 58.1
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 5.6e-156 555.1 503 59.6
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 8.1e-155 551.2 512 57.2
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 8.1e-155 551.2 512 57.2
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 6.9e-154 548.1 487 60.4
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.4e-151 540.4 490 58.8
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.4e-151 540.4 478 57.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 9.3e-151 537.7 506 56.1
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.1e-150 536.6 497 57.1
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.7e-150 536.2 503 58.3
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 3.5e-150 535.8 502 57.6
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.0e-149 534.3 443 61.9
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.0e-149 534.3 494 55.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.0e-149 534.3 367 71.1
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.0e-149 534.3 502 57.4
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.3e-149 533.9 406 65.8
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 5.6e-148 528.5 437 60.9
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.1e-147 526.6 506 56.5
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.1e-146 524.2 504 58.1
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.2e-145 520.8 380 63.7
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.5e-145 520.4 505 53.3
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 2.0e-145 520.0 504 55.6
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 7.6e-145 518.1 498 56.2
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 9.9e-145 517.7 505 53.7
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.3e-144 517.3 481 57.6
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.7e-144 516.9 504 55.6
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.7e-144 516.9 507 53.6
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.1e-143 514.2 379 66.0
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-143 513.8 439 60.6
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 7.1e-143 511.5 462 55.2
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.1e-142 510.0 477 55.8
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.3e-141 507.3 467 56.5
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.8e-141 506.9 451 60.3
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 3.0e-141 506.1 391 62.9
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 6.7e-141 505.0 441 58.0
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.5e-140 503.8 517 55.7
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 3.3e-140 502.7 392 63.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.6e-139 500.4 436 59.4
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.6e-139 500.4 443 58.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-139 500.4 449 58.4
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 2.8e-139 499.6 443 58.7
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 8.1e-139 498.0 513 53.0
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.4e-137 492.7 459 54.0
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 5.8e-137 491.9 420 59.3
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.3e-136 490.7 440 58.4
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 2.2e-136 490.0 498 54.6
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 8.4e-136 488.0 479 55.1
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.9e-135 486.9 436 56.0
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.5e-135 486.5 496 54.4
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.2e-135 486.1 423 58.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.1e-135 485.0 496 54.2
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 7.1e-135 485.0 441 56.9
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 7.1e-135 485.0 423 58.2
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 9.3e-135 484.6 420 59.5
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 9.3e-135 484.6 420 59.5
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 9.3e-135 484.6 420 59.5
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 2.1e-134 483.4 485 54.2
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 3.5e-134 482.6 503 53.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.0e-134 481.9 505 53.3
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 7.9e-134 481.5 497 53.9
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.0e-133 481.1 496 53.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 8.7e-133 478.0 497 53.7
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.3e-132 475.7 483 58.8
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 7.6e-129 464.9 461 55.7
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-126 457.6 502 51.2
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.5e-126 456.1 416 57.7
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 4.6e-126 455.7 401 56.6
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.9e-124 450.3 506 52.0
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.3e-122 442.2 435 50.3
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.0e-121 440.3 504 49.2
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.1e-102 377.1 435 46.0
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 9.8e-92 341.7 333 56.5
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.5e-81 306.2 263 59.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 8.6e-80 302.0 210 65.7
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.2e-78 298.1 495 39.2
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 2.3e-77 293.9 362 46.1
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.2e-75 287.3 366 43.4
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 8.6e-72 275.4 339 46.6
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 8.9e-69 265.4 403 39.0
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.4e-58 231.5 319 42.6
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 7.1e-58 229.2 399 38.3
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 3.0e-48 197.2 227 55.5
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.2e-34 150.2 426 31.7
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.8e-32 144.8 113 64.6
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 5.6e-31 139.8 186 45.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.8e-30 137.5 129 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 4.8e-30 136.7 381 30.4
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.0e-24 119.0 339 33.0
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.2e-22 109.8 424 26.9
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.9e-21 106.3 225 35.6
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 4.5e-20 103.6 58 77.6
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.5e-17 94.0 319 31.0


User provided reference genes

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