Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G273800 Prunus persica HOM05D000051 ORTHO05D334133 7.3e-266 920.2 544 100.0
MD10G1043500 Malus domestica HOM05D000903 ORTHO05D000731 8.0e-39 166.0 440 29.3
Lj2A948G37 Lonicera japonica HOM05D000051 ORTHO05D000015 1.7e-17 95.1 436 24.3
MD11G1256200 Malus domestica HOM05D000051 ORTHO05D000015 1.9e-16 91.7 459 25.7
Duzib213G0573 Durio zibethinus HOM05D000051 ORTHO05D000015 3.6e-15 87.4 389 27.5
vmacro14310 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 1.2e-13 82.4 390 25.9
MD11G1266800 Malus domestica HOM05D000051 ORTHO05D000015 1.5e-13 82.0 442 24.4
Prupe.4G158800 Prunus persica HOM05D000051 ORTHO05D000015 1.5e-13 82.0 463 25.5
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 6.4e-12 76.6 453 23.0
FAN18G4561 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.1e-11 75.9 337 24.9
Prupe.4G161200 Prunus persica HOM05D000051 ORTHO05D000015 1.1e-11 75.9 460 22.8
QL08p012322 Quercus lobata HOM05D000051 ORTHO05D000015 1.1e-11 75.9 444 25.2
RcHm_v2.0_Chr6g0304711 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-11 75.5 426 24.9
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 1.9e-11 75.1 256 26.6
A07p43970 Brassica napus HOM05D000051 ORTHO05D000015 9.2e-11 72.8 285 27.7
QL08p012292 Quercus lobata HOM05D000051 ORTHO05D000015 1.2e-10 72.4 415 25.1
FAN21G3599 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-10 72.0 276 23.9
RcHm_v2.0_Chr5g0028411 Rosa chinensis HOM05D000051 ORTHO05D000015 1.6e-10 72.0 433 23.3
HanXRQChr01g0005001 Helianthus annuus HOM05D000051 ORTHO05D000015 2.1e-10 71.6 441 25.4
QL06p002351 Quercus lobata HOM05D000051 ORTHO05D000015 2.1e-10 71.6 415 24.8
Thecc.07G080800 Theobroma cacao HOM05D000051 ORTHO05D000015 2.1e-10 71.6 407 23.1
FAN25G3081 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.7e-10 71.2 274 24.1
FvH4_5g35600 Fragaria vesca HOM05D000051 ORTHO05D000015 3.5e-10 70.9 315 25.4
Duzib213G0051 Durio zibethinus HOM05D000051 ORTHO05D000015 7.8e-10 69.7 421 24.2
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 7.8e-10 69.7 376 24.7
Prupe.4G160900 Prunus persica HOM05D000051 ORTHO05D000015 1.0e-09 69.3 417 23.3
Thecc.07G080700 Theobroma cacao HOM05D000051 ORTHO05D000015 1.0e-09 69.3 442 24.4
FvH4_3g17061 Fragaria vesca HOM05D000051 ORTHO05D000015 2.3e-09 68.2 279 24.7
QL08p012268 Quercus lobata HOM05D000051 ORTHO05D000015 6.6e-09 66.6 384 25.0
AL2G39130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-08 65.9 286 27.3
Prupe.1G285400 Prunus persica HOM05D000051 ORTHO05D000015 1.1e-08 65.9 192 27.1
QL06p002325 Quercus lobata HOM05D000051 ORTHO05D000015 1.1e-08 65.9 396 24.7
COL.COLO4_09414 Corchorus olitorius HOM05D000051 ORTHO05D000015 1.5e-08 65.5 301 24.6
Thhalv10013502m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.5e-08 65.5 267 26.2
FAN04G3087 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.5e-08 65.5 448 25.0
Lsat_1_v5_gn_1_127701 Lactuca sativa HOM05D000051 ORTHO05D000015 1.5e-08 65.5 436 23.9
QL08p020672 Quercus lobata HOM05D000051 ORTHO05D000015 1.9e-08 65.1 262 27.1
QL08p020709 Quercus lobata HOM05D000051 ORTHO05D000015 1.9e-08 65.1 248 27.0
BcaB08g34327 Brassica carinata HOM05D000051 ORTHO05D000015 2.5e-08 64.7 395 25.3
Prupe.4G161300 Prunus persica HOM05D000051 ORTHO05D000015 2.5e-08 64.7 425 22.1
Carub.0006s2042 Capsella rubella HOM05D000051 ORTHO05D000015 4.3e-08 63.9 269 24.9
Ciclev10003148m.g Citrus clementina HOM05D000051 ORTHO05D000015 4.3e-08 63.9 429 21.4
Thhalv10002518m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.3e-08 63.9 279 25.8
FvH4_5g02210 Fragaria vesca HOM05D000051 ORTHO05D000015 5.6e-08 63.5 321 24.6
BcaC06g31579 Brassica carinata HOM05D000051 ORTHO05D000015 7.3e-08 63.2 305 24.6
Dinv21722 Davidia involucrata HOM05D000051 ORTHO05D000015 7.3e-08 63.2 410 22.0
CARHR053720 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.6e-08 62.8 412 22.8
QL08p010791 Quercus lobata HOM05D000051 ORTHO05D000015 9.6e-08 62.8 441 25.2
AL6G33710 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.2e-07 62.4 404 23.8
Thhalv10000888m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.2e-07 62.4 270 27.0
C08p46820 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-07 62.0 406 25.4
FvH4_5g02280 Fragaria vesca HOM05D000051 ORTHO05D000015 1.6e-07 62.0 281 26.7
FAN18G3549 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-07 62.0 321 24.6
Carub.0008s0336 Capsella rubella HOM05D000051 ORTHO05D000015 2.1e-07 61.6 288 26.7
Carub.0006s2038 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-07 61.2 269 24.5
CARHR073990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.8e-07 61.2 388 23.2
MD11G1266000 Malus domestica HOM05D000051 ORTHO05D000015 2.8e-07 61.2 285 23.9
BcaC06g34496 Brassica carinata HOM05D000051 ORTHO05D000015 3.6e-07 60.8 293 24.9
BolC7t43318H Brassica oleracea HOM05D000051 ORTHO05D000015 3.6e-07 60.8 293 24.9
RcHm_v2.0_Chr5g0028201 Rosa chinensis HOM05D000051 ORTHO05D000015 3.6e-07 60.8 342 26.0
Aa31LG7G1370 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.7e-07 60.5 285 26.3
BcaB08g34328 Brassica carinata HOM05D000537 ORTHO05D000415 4.7e-07 60.5 277 27.1
Thhalv10006442m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 4.7e-07 60.5 378 24.1
AL7G47410 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.2e-07 60.1 471 21.7
BraA09t41687Z Brassica rapa HOM05D000051 ORTHO05D000015 6.2e-07 60.1 406 25.4
Carub.0008s1384 Capsella rubella HOM05D000051 ORTHO05D000015 6.2e-07 60.1 442 24.0
Rhsim06G0214100 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.2e-07 60.1 184 28.8
A06p12850 Brassica napus HOM05D000051 ORTHO05D000015 8.1e-07 59.7 382 23.3
C07p27880 Brassica napus HOM05D000051 ORTHO05D000015 8.1e-07 59.7 282 24.5
AL2G39150 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-06 59.3 268 26.1
FAN20G2836 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.1e-06 59.3 270 25.6
AT1G78760 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.4e-06 58.9 268 26.5
Dinv17489 Davidia involucrata HOM05D000051 ORTHO05D000015 1.4e-06 58.9 441 21.5
Thecc.04G036300 Theobroma cacao HOM05D000051 ORTHO05D000015 1.4e-06 58.9 295 22.0
BolC3t17907H Brassica oleracea HOM05D000689 ORTHO05D000015 1.8e-06 58.5 439 19.1
Potri.011G121400 Populus trichocarpa HOM05D000051 ORTHO05D000015 1.8e-06 58.5 458 22.5
vmacro11750 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 1.8e-06 58.5 279 28.7
Thhalv10001207m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.4e-06 58.2 270 25.6
QL02p085127 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-06 58.2 257 25.3
AT5G22660 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-06 57.8 253 24.9
C05p15250 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-06 57.8 382 23.0
BcaC07g42596 Brassica carinata HOM05D000689 ORTHO05D000015 4.0e-06 57.4 447 21.7
Dinv04084 Davidia involucrata HOM05D000051 ORTHO05D000015 4.0e-06 57.4 318 24.2
FvH4_5g02221 Fragaria vesca HOM05D000051 ORTHO05D000015 4.0e-06 57.4 281 24.9
FAN25G2060 Fragaria x ananassa HOM05D000051 ORTHO05D000015 5.2e-06 57.0 304 24.7
QL05p074490 Quercus lobata HOM05D000051 ORTHO05D000015 5.2e-06 57.0 281 24.9
CARHR190920 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.8e-06 56.6 276 24.3
Rhsim01G0199000 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.8e-06 56.6 176 29.0
Sp5g33780 Schrenkiella parvula HOM05D000051 ORTHO05D000015 6.8e-06 56.6 275 24.0
FAN14G2385 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.9e-06 56.2 422 23.0
HanXRQChr05g0151171 Helianthus annuus HOM05D000051 ORTHO05D000015 8.9e-06 56.2 184 26.1
MD11G1275600 Malus domestica HOM05D000051 ORTHO05D000015 8.9e-06 56.2 428 22.7
QL05p074499 Quercus lobata HOM05D000051 ORTHO05D000015 8.9e-06 56.2 290 24.8
QL08p020517 Quercus lobata HOM05D000051 ORTHO05D000015 8.9e-06 56.2 446 22.9


User provided reference genes

Program Settings