Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 1.8e-238 828.9 446 100.0
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 6.4e-143 511.5 373 77.7
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 8.6e-132 474.6 403 67.0
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 6.8e-129 464.9 410 66.3
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 3.2e-126 456.1 403 64.5
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 1.2e-125 454.1 405 64.4
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 3.9e-124 449.1 453 61.1
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 3.6e-122 442.6 410 62.9
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 3.1e-121 439.5 408 63.2
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 5.3e-121 438.7 405 61.5
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 1.1e-115 421.0 405 62.0
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 4.5e-112 409.1 408 60.3
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 5.1e-108 395.6 403 58.1
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 3.9e-100 369.4 404 54.5
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 6.9e-97 358.6 283 67.1
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 8.4e-95 351.7 317 60.9
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 1.4e-94 350.9 370 57.3
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 4.6e-93 345.9 389 54.0
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 7.9e-93 345.1 442 50.7
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 2.5e-91 340.1 385 55.3
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.1e-89 334.7 231 78.8
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 1.3e-87 327.8 317 57.1
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 2.9e-87 326.6 302 59.6
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 8.5e-87 325.1 363 54.3
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 8.5e-87 325.1 420 51.4
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 2.5e-86 323.6 411 50.1
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 9.4e-86 321.6 397 50.9
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 5.1e-84 315.8 404 51.2
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 4.3e-83 312.8 350 53.7
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 1.1e-81 308.1 317 58.4
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 6.9e-81 305.4 454 47.6
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 2.6e-80 303.5 405 49.6
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.0e-79 301.6 310 57.4
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 1.7e-79 300.8 420 49.3
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 5.0e-79 299.3 294 57.8
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 5.0e-79 299.3 242 69.8
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 4.2e-78 296.2 287 58.2
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 3.6e-77 293.1 413 48.9
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 1.5e-75 287.7 282 58.5
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 3.3e-75 286.6 404 47.3
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 5.7e-75 285.8 378 48.7
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 3.1e-73 280.0 429 44.1
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 2.0e-72 277.3 440 43.6
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 3.5e-72 276.6 427 43.3
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 1.3e-71 274.6 237 63.7
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 2.9e-71 273.5 292 54.8
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 6.1e-69 265.8 404 45.5
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 3.0e-68 263.5 331 49.2
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 5.7e-67 259.2 460 40.7
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 2.8e-66 256.9 328 50.3
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 3.7e-66 256.5 258 56.6
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 1.4e-65 254.6 329 49.2
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 1.6e-64 251.1 317 49.8
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 5.0e-63 246.1 417 39.8
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 7.2e-62 242.3 317 47.9
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 1.6e-61 241.1 278 52.5
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 3.6e-61 240.0 412 40.3
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 6.3e-58 229.2 405 42.0
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 4.1e-57 226.5 167 74.3
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 9.1e-57 225.3 428 40.9
RcHm_v2.0_Chr4g0445121 Rosa chinensis HOM05D007593 ORTHO05D009686 8.5e-55 218.8 171 68.4
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 4.0e-52 209.9 438 37.9
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 4.0e-52 209.9 395 39.0
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 8.8e-52 208.8 167 68.9
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 1.5e-51 208.0 156 75.0
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 1.7e-47 194.5 167 67.1
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 4.4e-43 179.9 186 56.5
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 3.5e-40 170.2 277 41.9
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 1.0e-39 168.7 364 34.9
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 3.9e-39 166.8 168 55.4
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 2.1e-37 161.0 130 65.4
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 2.3e-36 157.5 285 38.2
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 1.9e-33 147.9 173 45.1
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 5.4e-33 146.4 113 72.6
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 4.4e-27 126.7 317 34.1
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 9.8e-27 125.6 176 39.8
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 3.2e-25 120.6 125 52.0
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 6.8e-20 102.8 111 56.8
Mapoly0067s0009 Marchantia polymorpha HOM05D007593 ORTHO05D009686 1.7e-18 98.2 294 24.8
CDE07G1947 Ceratophyllum demersum HOM05D007593 ORTHO05D009686 4.1e-17 93.6 138 40.6
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 1.2e-16 92.0 299 25.4
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 2.7e-16 90.9 74 74.3
Ciclev10033560m.g Citrus clementina HOM05D007593 ORTHO05D009686 3.6e-13 80.5 91 51.6
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 8.9e-12 75.9 233 32.6
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 5.8e-11 73.2 222 26.1
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 1.3e-10 72.0 85 50.6
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 8.4e-10 69.3 114 45.6
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 4.2e-09 67.0 59 69.5
TAR629G0814 Trochodendron aralioides HOM05D007593 ORTHO05D009686 2.7e-08 64.3 59 54.2
MBI01_g46270_MAGBIO Magnolia biondii HOM05D007593 ORTHO05D009686 4.6e-08 63.5 115 37.4
Sc04g0008650 Simmondsia chinensis HOM05D007593 ORTHO05D009686 2.3e-07 61.2 157 33.1
HanXRQChr12g0371121 Helianthus annuus HOM05D007593 ORTHO05D048270 1.5e-06 58.5 173 30.6
TAR629G1825 Trochodendron aralioides HOM05D007593 ORTHO05D009686 3.3e-06 57.4 102 42.2
SMO296G0037 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 7.3e-06 56.2 453 22.3


User provided reference genes

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