Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 5.4e-159 564.3 293 100.0
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 5.5e-111 404.8 298 76.5
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 9.4e-111 404.1 289 74.4
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 1.2e-110 403.7 289 74.0
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.1e-106 389.0 315 68.6
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 1.6e-105 386.7 293 70.0
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 1.9e-103 379.8 294 69.4
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 1.2e-102 377.1 291 69.1
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.1e-98 362.1 328 62.8
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 8.0e-94 347.8 289 67.8
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 3.0e-93 345.9 282 66.0
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.4e-90 337.0 285 62.8
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 3.5e-89 332.4 234 73.5
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 5.9e-89 331.6 294 62.6
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 4.3e-87 325.5 294 60.9
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 2.8e-86 322.8 294 60.9
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 6.1e-86 321.6 274 63.5
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 1.8e-85 320.1 272 63.6
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.8e-85 320.1 298 59.7
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 4.0e-85 318.9 286 59.8
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 1.2e-84 317.4 273 63.7
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.2e-84 317.4 272 63.6
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.7e-83 313.5 291 58.8
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 1.7e-83 313.5 267 61.0
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 2.2e-83 313.2 288 61.1
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.9e-83 312.8 274 62.4
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 8.3e-83 311.2 262 62.2
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 4.1e-82 308.9 285 60.7
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 4.1e-82 308.9 246 64.2
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.3e-80 303.9 244 64.8
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 1.3e-80 303.9 290 57.2
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 5.0e-80 302.0 300 56.0
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 5.0e-80 302.0 242 64.5
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 1.5e-79 300.4 287 55.1
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.9e-79 300.1 227 64.3
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 1.9e-79 300.1 285 56.5
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 2.5e-79 299.7 293 56.7
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 4.3e-79 298.9 248 59.7
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 4.3e-79 298.9 287 56.8
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 1.2e-78 297.4 272 59.9
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 1.6e-78 297.0 249 61.4
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 2.1e-78 296.6 247 61.9
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 2.8e-78 296.2 286 56.6
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.6e-78 295.8 227 64.3
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 4.7e-78 295.4 258 60.5
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 1.1e-77 294.3 281 56.6
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 3.1e-77 292.7 238 63.9
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 3.1e-77 292.7 271 59.0
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 5.2e-77 292.0 270 58.9
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 6.8e-77 291.6 258 60.5
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 6.8e-77 291.6 232 63.4
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 8.9e-77 291.2 228 63.2
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 1.2e-76 290.8 227 65.6
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 1.5e-76 290.4 227 65.2
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 2.0e-76 290.0 253 59.7
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 2.0e-76 290.0 269 58.7
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 3.4e-76 289.3 261 56.7
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 9.8e-76 287.7 280 57.1
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 9.8e-76 287.7 228 62.3
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 1.3e-75 287.3 257 58.0
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 1.3e-75 287.3 256 57.0
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 1.3e-75 287.3 272 54.8
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 1.3e-75 287.3 227 62.1
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 1.3e-75 287.3 274 56.6
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 1.7e-75 287.0 266 55.6
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 2.2e-75 286.6 269 55.4
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 2.9e-75 286.2 263 56.3
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 2.9e-75 286.2 262 56.5
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 4.9e-75 285.4 255 60.0
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 6.4e-75 285.0 240 61.2
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 6.4e-75 285.0 309 50.5
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 1.1e-74 284.3 238 59.2
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 1.1e-74 284.3 234 62.0
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 2.4e-74 283.1 243 60.9
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 4.1e-74 282.3 263 56.7
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 4.1e-74 282.3 289 55.4
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 5.4e-74 282.0 235 62.6
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 7.0e-74 281.6 235 62.1
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 1.2e-73 280.8 236 59.3
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 2.1e-73 280.0 238 58.0
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 2.1e-73 280.0 261 55.6
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 2.1e-73 280.0 307 51.8
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 2.7e-73 279.6 295 54.2
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 3.5e-73 279.3 277 52.7
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 4.6e-73 278.9 242 59.9
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 4.6e-73 278.9 234 62.0
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 7.8e-73 278.1 256 58.2
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 1.0e-72 277.7 239 57.3
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 1.3e-72 277.3 240 60.0
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 1.3e-72 277.3 232 60.3
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 1.7e-72 276.9 271 54.2
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 3.9e-72 275.8 239 57.3
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 5.1e-72 275.4 278 56.1
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 6.6e-72 275.0 259 56.4
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 6.6e-72 275.0 250 61.6
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 1.1e-71 274.2 240 57.1
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 3.3e-71 272.7 238 57.1
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 5.6e-71 271.9 228 59.6
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 9.5e-71 271.2 240 59.6
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 3.6e-70 269.2 230 61.3
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 8.1e-70 268.1 304 50.0
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 4.0e-69 265.8 297 49.5
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 5.2e-69 265.4 276 53.3
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 8.9e-69 264.6 261 53.3
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 2.6e-68 263.1 222 59.9
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 4.4e-68 262.3 215 62.8
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 1.1e-66 257.7 215 59.5
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 3.2e-66 256.1 267 52.1
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 5.4e-66 255.4 262 52.7
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 1.2e-65 254.2 227 57.3
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 1.6e-65 253.8 201 64.7
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 1.0e-64 251.1 237 58.2
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.7e-64 250.4 316 48.1
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 7.3e-63 245.0 228 54.8
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 3.6e-62 242.7 279 48.7
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 1.8e-61 240.4 195 62.1
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 6.4e-59 231.9 225 54.2
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 1.9e-58 230.3 244 54.1
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 7.1e-58 228.4 197 58.9
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 9.2e-58 228.0 287 46.0
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 2.7e-57 226.5 229 55.5
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 1.1e-55 221.1 143 76.9
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 7.3e-55 218.4 161 67.7
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 1.3e-54 217.6 198 57.1
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 2.1e-54 216.9 149 73.8
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 6.2e-54 215.3 222 52.7
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 3.1e-53 213.0 219 52.5
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 4.0e-53 212.6 143 74.1
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 2.0e-52 210.3 270 45.6
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 9.9e-52 208.0 145 71.7
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 7.1e-50 201.8 144 68.1
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 7.8e-49 198.4 171 67.3
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 8.7e-48 194.9 159 62.3
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 1.1e-47 194.5 285 44.2
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.8e-46 189.9 275 45.1
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 4.8e-38 162.5 246 39.4
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 8.1e-38 161.8 174 48.3
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 4.9e-35 152.5 163 50.3
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 6.5e-35 152.1 135 55.6
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.4e-34 151.0 153 51.6
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 5.5e-34 149.1 96 75.0
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 7.9e-33 145.2 129 58.1
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 1.0e-27 128.3 143 53.1
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 2.7e-25 120.2 212 36.3
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 5.7e-23 112.5 95 62.1
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 1.3e-19 101.3 108 53.7
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 3.8e-19 99.8 239 31.0
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 1.6e-17 94.4 245 31.4
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 3.9e-16 89.7 95 47.4
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.8e-14 82.8 103 48.5
Hund25310 Selenicereus undatus HOM05D004983 ORTHO05D005847 1.7e-06 57.8 214 29.4


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