Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 2.2e-183 645.6 351 100.0
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 1.7e-111 406.8 344 64.5
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 1.5e-91 340.5 369 49.6
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.2e-88 330.9 369 49.6
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-85 320.9 372 48.7
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.8e-85 318.9 302 55.6
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.8e-85 318.9 302 55.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 8.4e-82 308.1 264 60.2
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.6e-75 286.6 396 44.7
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 6.1e-72 275.4 325 47.4
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 1.3e-71 274.2 348 46.0
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 2.2e-69 266.9 277 53.8
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 8.2e-69 265.0 355 42.3
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 2.9e-66 256.5 346 43.1
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.1e-64 250.4 352 43.5
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 2.7e-64 250.0 349 42.4
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 7.9e-64 248.4 345 44.1
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 1.0e-63 248.1 346 43.4
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 2.3e-63 246.9 346 42.5
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.0e-63 246.5 276 46.4
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 8.8e-63 245.0 334 44.0
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 3.3e-62 243.0 347 41.5
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 6.3e-61 238.8 359 39.0
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 1.4e-60 237.7 346 42.5
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 7.7e-59 231.9 345 40.0
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.7e-59 231.9 375 40.3
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 1.7e-58 230.7 349 40.1
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.7e-56 223.4 164 63.4
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 2.7e-56 223.4 260 45.4
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.4e-55 221.1 321 42.1
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 9.7e-54 214.9 347 37.2
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-53 214.5 172 61.0
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.1e-52 211.5 333 38.4
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 3.5e-51 206.5 322 39.4
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 7.7e-51 205.3 319 38.6
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.7e-50 204.1 346 37.6
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.2e-50 203.8 362 38.7
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 2.9e-50 203.4 281 43.4
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 5.0e-50 202.6 332 41.0
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 1.1e-49 201.4 276 42.8
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 3.2e-49 199.9 348 38.8
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 5.5e-49 199.1 350 36.3
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 1.6e-48 197.6 278 42.8
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.4e-47 194.5 275 42.2
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 1.1e-46 191.4 318 38.1
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 4.5e-43 179.5 330 36.7
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 1.0e-42 178.3 346 35.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 8.5e-42 175.3 349 35.5
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 1.5e-41 174.5 347 35.7
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 8.8e-39 165.2 363 32.0
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 1.2e-38 164.9 355 33.8
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 7.5e-38 162.2 346 32.9
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 9.8e-38 161.8 325 34.5
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 4.8e-37 159.5 270 36.3
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.1e-36 158.3 319 34.5
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 7.0e-36 155.6 320 34.4
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 7.0e-36 155.6 342 31.3
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.6e-35 154.5 352 32.1
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 3.5e-35 153.3 339 33.3
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 5.9e-35 152.5 363 30.9
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 5.0e-34 149.4 357 32.2
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 1.9e-33 147.5 282 36.2
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 4.2e-33 146.4 257 38.1
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 5.5e-33 146.0 293 33.8
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 2.1e-32 144.1 324 32.4
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 2.7e-32 143.7 329 33.7
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 4.7e-32 142.9 338 30.5
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 5.2e-31 139.4 348 30.7
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 6.8e-31 139.0 181 43.6
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 8.8e-31 138.7 251 40.2
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 3.4e-30 136.7 321 31.8
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 3.4e-30 136.7 271 32.1
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 9.8e-30 135.2 328 32.3
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 2.8e-29 133.7 262 37.4
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 6.3e-29 132.5 219 36.5
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.3e-29 132.1 329 31.9
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 5.4e-28 129.4 337 28.8
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 2.0e-27 127.5 262 35.1
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 5.9e-27 125.9 351 32.2
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 7.7e-27 125.6 193 36.8
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.7e-26 124.4 126 53.2
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 2.9e-26 123.6 402 26.9
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.9e-25 120.9 313 28.8
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 3.3e-25 120.2 352 30.4
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.6e-24 117.9 361 26.9
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 2.8e-24 117.1 89 60.7
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 1.0e-23 115.2 327 29.7
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.3e-23 114.0 348 27.9
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.0e-23 113.6 232 34.9
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 6.8e-23 112.5 332 29.5
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 1.5e-22 111.3 284 30.6
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 4.4e-22 109.8 132 43.2
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 5.7e-22 109.4 209 35.4
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 1.3e-21 108.2 133 42.1
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 2.9e-21 107.1 247 30.4
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 3.7e-21 106.7 387 30.2
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 1.1e-20 105.1 185 36.2
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 7.8e-19 99.0 184 34.8
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.3e-18 97.4 146 37.0
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 2.9e-18 97.1 245 30.2
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 8.6e-18 95.5 221 29.0
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 4.3e-17 93.2 282 29.8
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 1.4e-15 88.2 282 28.7
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 6.8e-15 85.9 155 35.5
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 2.9e-13 80.5 190 33.2
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 4.1e-12 76.6 113 40.7
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 3.9e-10 70.1 112 34.8
HPP92_008334 Vanilla planifolia HOM05D034240 ORTHO05D007798 6.6e-10 69.3 223 26.5
Lalb_Chr16g0392231 Lupinus albus HOM05D006585 ORTHO05D007798 1.1e-09 68.6 111 36.9
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 1.9e-09 67.8 97 38.1
SalBow8G2270 Salvia bowleyana HOM05D006585 ORTHO05D007798 2.1e-08 64.3 217 24.9
AUR62008166 Chenopodium quinoa HOM05D000060 ORTHO05D000082 8.9e-07 58.9 64 46.9
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 2.0e-06 57.8 93 35.5
AUR62005444 Chenopodium quinoa HOM05D006585 ORTHO05D007798 2.6e-06 57.4 143 34.3
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 3.4e-06 57.0 93 35.5


User provided reference genes

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