Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G243200 Prunus persica HOM05D005436 ORTHO05D006215 5.9e-157 557.8 341 100.0
MD13G1102600 Malus domestica HOM05D005436 ORTHO05D006215 2.4e-113 412.9 339 80.8
Cfa009203 Carpinus fangiana HOM05D005436 ORTHO05D006215 1.4e-94 350.5 337 72.4
Manes.13G025400 Manihot esculenta HOM05D005436 ORTHO05D006215 4.2e-94 349.0 336 70.8
QL03p058434 Quercus lobata HOM05D005436 ORTHO05D006215 1.6e-93 347.1 337 73.6
Potri.010G045300 Populus trichocarpa HOM05D005436 ORTHO05D006215 5.1e-92 342.0 341 69.2
Gorai.009G335800 Gossypium raimondii HOM05D005436 ORTHO05D006215 6.7e-92 341.7 337 71.2
TAR629G0589 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.1e-91 340.9 354 66.7
Gohir.A05G312700 Gossypium hirsutum HOM05D005436 ORTHO05D006215 2.5e-91 339.7 337 71.2
COL.COLO4_24251 Corchorus olitorius HOM05D005436 ORTHO05D006215 1.3e-90 337.4 345 69.3
TAR629G3419 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.3e-90 337.4 354 66.4
Thecc.02G258400 Theobroma cacao HOM05D005436 ORTHO05D006215 1.6e-90 337.0 337 70.9
Sabra10G0023000 Salix brachista HOM05D005436 ORTHO05D006215 2.8e-90 336.3 337 68.8
Duzib251G0682 Durio zibethinus HOM05D005436 ORTHO05D006215 1.1e-89 334.3 337 70.0
Atru.chr11.2113 Acer truncatum HOM05D005436 ORTHO05D006215 1.5e-88 330.5 346 66.5
Atru.chr11.2128 Acer truncatum HOM05D005436 ORTHO05D006215 1.5e-88 330.5 346 66.5
CiPaw.05G183100 Carya illinoinensis HOM05D005436 ORTHO05D006215 1.5e-88 330.5 340 70.3
Actinidia27803 Actinidia chinensis HOM05D005436 ORTHO05D006215 1.0e-87 327.8 348 67.0
Rhsim12G0040900 Rhododendron simsii HOM05D005436 ORTHO05D006215 5.0e-87 325.5 353 66.3
MSTRG.7922 Avicennia marina HOM05D005436 ORTHO05D006215 1.4e-86 323.9 348 67.0
CSS0002796 Camellia sinensis var. sinensis HOM05D005436 ORTHO05D006215 1.9e-86 323.6 357 64.4
Sp5g25750 Schrenkiella parvula HOM05D005436 ORTHO05D006215 2.5e-86 323.2 343 65.6
THA.LOC104822162 Tarenaya hassleriana HOM05D005436 ORTHO05D006215 3.2e-86 322.8 342 67.0
Carub.0002s1732 Capsella rubella HOM05D005436 ORTHO05D006215 5.5e-86 322.0 340 65.9
Ciclev10032010m.g Citrus clementina HOM05D005436 ORTHO05D006215 5.5e-86 322.0 341 67.4
PGR119G1276 Punica granatum HOM05D005436 ORTHO05D006215 1.6e-85 320.5 311 71.7
ClCG08G017720 Citrullus lanatus HOM05D005436 ORTHO05D006215 2.1e-85 320.1 367 63.5
CsaV3_2G024910 Cucumis sativus L. HOM05D005436 ORTHO05D006215 2.1e-85 320.1 367 64.3
Lsat_1_v5_gn_8_150780 Lactuca sativa HOM05D005436 ORTHO05D006215 2.1e-85 320.1 338 66.9
Lj3A1057T77 Lonicera japonica HOM05D005436 ORTHO05D006215 2.1e-85 320.1 338 68.0
RcHm_v2.0_Chr4g0432791 Rosa chinensis HOM05D005436 ORTHO05D006215 2.1e-85 320.1 340 68.8
CANSAT01G1386 Cannabis sativa HOM05D005436 ORTHO05D006215 6.1e-85 318.5 355 58.3
EL10Ac6g13796 Beta vulgaris HOM05D005436 ORTHO05D006215 1.3e-84 317.4 339 66.4
AUR62005449 Chenopodium quinoa HOM05D005436 ORTHO05D006215 5.1e-84 315.5 343 64.7
HanXRQChr08g0208111 Helianthus annuus HOM05D005436 ORTHO05D006215 8.7e-84 314.7 348 65.2
MSTRG.2420 Avicennia marina HOM05D005436 ORTHO05D006215 3.3e-83 312.8 339 65.8
FvH4_4g25470 Fragaria vesca HOM05D005436 ORTHO05D006215 3.3e-83 312.8 338 68.3
AL2G30010 Arabidopsis lyrata HOM05D005436 ORTHO05D006215 5.7e-83 312.0 348 63.8
TWI36G0572 Tripterygium wilfordii HOM05D005436 ORTHO05D006215 1.3e-82 310.8 341 65.1
Aa31LG4G10370 Aethionema arabicum HOM05D005436 ORTHO05D006215 2.2e-82 310.1 345 64.6
FAN17G0814 Fragaria x ananassa HOM05D005436 ORTHO05D006215 2.2e-82 310.1 340 67.6
Oeu001711.1 Olea europaea HOM05D005436 ORTHO05D006215 2.2e-82 310.1 343 65.9
Hund25385 Selenicereus undatus HOM05D005436 ORTHO05D006215 2.2e-82 310.1 344 64.8
Gohir.D01G151000 Gossypium hirsutum HOM05D005436 ORTHO05D006215 2.8e-82 309.7 337 67.4
Gorai.002G187200 Gossypium raimondii HOM05D005436 ORTHO05D006215 2.8e-82 309.7 337 67.4
Nitab4.5_0004301g0010 Nicotiana tabacum HOM05D005436 ORTHO05D006215 4.8e-82 308.9 343 64.7
CARHR063810 Cardamine hirsuta HOM05D005436 ORTHO05D006215 1.4e-81 307.4 339 64.6
MELO3C010688.2 Cucumis melo HOM05D005436 ORTHO05D006215 1.8e-81 307.0 394 46.4
Eucgr.H02509 Eucalyptus grandis HOM05D005436 ORTHO05D006215 3.1e-81 306.2 293 72.7
BraA07t31265Z Brassica rapa HOM05D005436 ORTHO05D006215 2.6e-80 303.1 353 61.8
PSO832G1925 Papaver somniferum HOM05D005436 ORTHO05D006215 3.4e-80 302.8 371 58.2
SGA_v2.0_scaffold87G27081 Striga asiatica HOM05D005436 ORTHO05D006215 3.4e-80 302.8 336 64.3
Ah.03g133110 Amaranthus hybridus HOM05D005436 ORTHO05D006215 4.5e-80 302.4 345 63.8
Gohir.A01G159300 Gossypium hirsutum HOM05D005436 ORTHO05D006215 4.5e-80 302.4 337 66.2
A07p37030 Brassica napus HOM05D005436 ORTHO05D006215 7.7e-80 301.6 351 61.8
C06p44590 Brassica napus HOM05D005436 ORTHO05D006215 1.0e-79 301.2 351 62.1
Thhalv10018848m.g Eutrema salsugineum HOM05D005436 ORTHO05D006215 1.7e-79 300.4 324 65.4
Cpa.g.sc33.9 Carica papaya HOM05D005436 ORTHO05D006215 3.8e-79 299.3 333 62.5
Manes.12G023900 Manihot esculenta HOM05D005436 ORTHO05D006215 5.0e-79 298.9 339 64.6
BolC6t39523H Brassica oleracea HOM05D005436 ORTHO05D006215 6.5e-79 298.5 353 61.5
Aqoxy5G03784 Aquilegia oxysepala HOM05D005436 ORTHO05D006215 1.1e-78 297.7 356 62.1
Migut.E00197 Erythranthe guttata HOM05D005436 ORTHO05D006215 1.4e-78 297.4 350 62.9
FAN07G0404 Fragaria x ananassa HOM05D005436 ORTHO05D006215 1.4e-78 297.4 340 66.2
FAN12G3651 Fragaria x ananassa HOM05D005436 ORTHO05D006215 5.5e-78 295.4 365 47.4
Lalb_Chr16g0381971 Lupinus albus HOM05D005436 ORTHO05D006215 9.4e-78 294.7 337 63.5
SHI17740 Sapria himalayana HOM05D005436 ORTHO05D006215 2.1e-77 293.5 323 66.3
Sc14g0008720 Simmondsia chinensis HOM05D005436 ORTHO05D006215 3.6e-77 292.7 350 62.6
VMungo1215G1754 Vigna mungo HOM05D005436 ORTHO05D006215 3.6e-77 292.7 337 60.2
Sopen01g003470 Solanum pennellii HOM05D005436 ORTHO05D006215 1.0e-76 291.2 284 70.4
Nitab4.5_0000069g0320 Nicotiana tabacum HOM05D005436 ORTHO05D006215 1.4e-76 290.8 278 71.2
AT1G70590 Arabidopsis thaliana HOM05D005436 ORTHO05D006215 2.3e-76 290.0 353 60.9
Sopen05g008220 Solanum pennellii HOM05D005436 ORTHO05D006215 3.9e-76 289.3 346 61.6
PGSC0003DMG400018621 Solanum tuberosum HOM05D005436 ORTHO05D006215 3.9e-76 289.3 343 63.3
Solyc01g007930.4 Solanum lycopersicum HOM05D005436 ORTHO05D006215 5.1e-76 288.9 284 70.4
Glyma.01G026500 Glycine max HOM05D005436 ORTHO05D006215 6.7e-76 288.5 338 60.4
Lj2g0004338 Lotus japonicus HOM05D005436 ORTHO05D006215 8.8e-76 288.1 339 62.2
Nitab4.5_0002631g0010 Nicotiana tabacum HOM05D005436 ORTHO05D006215 2.0e-75 287.0 330 64.2
Solyc05g013410.3 Solanum lycopersicum HOM05D005436 ORTHO05D006215 2.6e-75 286.6 340 62.1
FAN22G0693 Fragaria x ananassa HOM05D005436 ORTHO05D006215 5.7e-75 285.4 338 65.1
PGSC0003DMG400016374 Solanum tuberosum HOM05D005436 ORTHO05D006215 3.7e-74 282.7 284 69.4
Dinv15239 Davidia involucrata HOM05D005436 ORTHO05D006215 6.3e-74 282.0 235 58.7
unitig_744.g24291 Utricularia gibba HOM05D005436 ORTHO05D006215 3.1e-73 279.6 336 58.9
Nitab4.5_0000740g0060 Nicotiana tabacum HOM05D005436 ORTHO05D006215 5.3e-73 278.9 342 61.4
CDE07G1825 Ceratophyllum demersum HOM05D005436 ORTHO05D006215 9.1e-73 278.1 346 60.1
Migut.L01484 Erythranthe guttata HOM05D005436 ORTHO05D006215 9.1e-73 278.1 284 70.1
Haze_12240 Corylus avellana HOM05D005436 ORTHO05D006215 1.2e-72 277.7 220 64.1
Glyma.02G038300 Glycine max HOM05D005436 ORTHO05D006215 3.4e-72 276.2 338 55.6
Medtr5g033210 Medicago truncatula HOM05D005436 ORTHO05D006215 3.4e-72 276.2 333 61.9
Actinidia08140 Actinidia chinensis HOM05D005436 ORTHO05D006215 8.5e-71 271.6 299 67.2
ATR0686G177 Amborella trichopoda HOM05D005436 ORTHO05D006215 8.5e-71 271.6 341 61.3
CAN.G282.54 Capsicum annuum HOM05D005436 ORTHO05D006215 8.5e-71 271.6 330 62.1
ECA233G4095 Erigeron canadensis HOM05D005436 ORTHO05D006215 1.1e-70 271.2 310 63.2
Gohir.D05G314200 Gossypium hirsutum HOM05D005436 ORTHO05D006215 1.1e-70 271.2 219 63.0
TAR371G0549 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.2e-69 267.7 245 55.5
arahy.Tifrunner.gnm1.ann1.9TCE4B Arachis hypogaea HOM05D005436 ORTHO05D006215 1.4e-68 264.2 339 60.5
DCAR_024434 Daucus carota HOM05D005436 ORTHO05D006215 2.6e-67 260.0 345 56.2
Phvul.002G150600 Phaseolus vulgaris HOM05D005436 ORTHO05D006215 7.4e-67 258.5 337 54.9
Sed0020021 Sechium edule HOM05D005436 ORTHO05D006215 1.3e-66 257.7 291 55.7
Ca_04576_v3 Cicer arietinum L. HOM05D005436 ORTHO05D006215 4.1e-65 252.7 333 59.5
Lalb_Chr09g0326141 Lupinus albus HOM05D005436 ORTHO05D006215 3.5e-64 249.6 336 57.7
Nn4g22635 Nelumbo nucifera HOM05D005436 ORTHO05D006215 7.7e-64 248.4 171 67.8
Potri.008G187200 Populus trichocarpa HOM05D005436 ORTHO05D006215 1.0e-63 248.1 219 57.1
vmacro01128 Vaccinium macrocarpon HOM05D005436 ORTHO05D006215 1.7e-63 247.3 305 63.3
SEGI_41390 Sequoiadendron giganteum HOM05D005436 ORTHO05D006215 1.2e-61 241.1 308 60.1
MBI10_g03014_MAGBIO Magnolia biondii HOM05D005436 ORTHO05D006215 6.1e-61 238.8 279 65.6
AUR62024292 Chenopodium quinoa HOM05D005436 ORTHO05D006215 3.3e-59 233.0 235 73.6
arahy.Tifrunner.gnm1.ann1.RINP63 Arachis hypogaea HOM05D005436 ORTHO05D006215 5.7e-59 232.3 415 49.6
BcaB03g14825 Brassica carinata HOM05D005436 ORTHO05D006215 2.8e-58 229.9 202 55.9
SalBow2G2235 Salvia bowleyana HOM05D005436 ORTHO05D006215 1.1e-57 228.0 289 61.6
HPP92_021381 Vanilla planifolia HOM05D005436 ORTHO05D006215 1.4e-57 227.6 346 53.2
unitig_21.g20870 Utricularia gibba HOM05D005436 ORTHO05D006215 1.3e-50 204.5 316 38.6
RcHm_v2.0_Chr7g0240871 Rosa chinensis HOM05D005436 ORTHO05D006215 2.7e-48 196.8 209 53.6
Pp3c16_22820 Physcomitrium patens HOM05D005436 ORTHO05D006215 5.5e-46 189.1 335 51.0
GSVIVG01004082001 Vitis vinifera HOM05D005436 ORTHO05D006215 2.0e-43 180.6 191 78.5
SMO334G0079 Selaginella moellendorffii HOM05D005436 ORTHO05D006215 6.3e-42 175.6 282 55.0
Psat2g092560 Pisum sativum HOM05D005436 ORTHO05D006215 1.6e-40 171.0 176 52.8
CAN.G227.3 Capsicum annuum HOM05D005436 ORTHO05D006215 3.5e-40 169.9 179 49.7
Cc11_g15600 Coffea canephora HOM05D005436 ORTHO05D006215 5.9e-40 169.1 191 75.4
Peaxi162Scf00128g00005 Petunia axillaris HOM05D005436 ORTHO05D006215 5.6e-38 162.5 242 60.7
Os04g0476000 Oryza sativa ssp. japonica HOM05D005436 ORTHO05D006215 3.0e-36 156.8 286 52.4
FAN18G0478 Fragaria x ananassa HOM05D005436 ORTHO05D006215 8.9e-36 155.2 204 45.6
CDE04G1163 Ceratophyllum demersum HOM05D005436 ORTHO05D006215 2.6e-35 153.7 214 41.1
FAN13G0137 Fragaria x ananassa HOM05D005436 ORTHO05D006215 3.2e-33 146.7 204 44.1
FAN08G0615 Fragaria x ananassa HOM05D005436 ORTHO05D006215 1.3e-31 141.4 204 43.1
CBR_g41529 Chara braunii HOM05D005436 ORTHO05D006215 3.9e-31 139.8 131 48.9
AagrBONN_evm.TU.Sc2ySwM_344.5149 Anthoceros agrestis HOM05D005436 ORTHO05D006215 1.9e-30 137.5 278 47.8
TAR371G0328 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.9e-25 120.9 142 85.9
FvH4_5g38910 Fragaria vesca HOM05D005436 ORTHO05D006215 1.2e-24 118.2 112 51.8
TPR.G38771 Trifolium pratense HOM05D005436 ORTHO05D006215 1.6e-24 117.9 84 67.9
CAN.G227.4 Capsicum annuum HOM05D005436 ORTHO05D006215 2.0e-24 117.5 159 76.1
TAR314G0004 Trochodendron aralioides HOM05D005436 ORTHO05D006215 2.6e-19 100.5 81 60.5
TAR633G1814 Trochodendron aralioides HOM05D005436 ORTHO05D006215 7.5e-19 99.0 127 83.5
RcHm_v2.0_Chr4g0436601 Rosa chinensis HOM05D005436 ORTHO05D006215 3.2e-17 93.6 84 54.8
TAR371G0429 Trochodendron aralioides HOM05D044080 ORTHO05D006215 4.6e-16 89.7 133 61.7
TPR.G38818 Trifolium pratense HOM05D005436 ORTHO05D006215 1.5e-14 84.7 62 64.5
TAR633G0170 Trochodendron aralioides HOM05D005436 ORTHO05D006215 3.3e-14 83.6 135 80.7
TAR314G0002 Trochodendron aralioides HOM05D005436 ORTHO05D006215 1.2e-11 75.1 41 78.0
RcHm_v2.0_Chr2g0120671 Rosa chinensis HOM05D009478 ORTHO05D010213 1.3e-10 71.6 42 71.4
FAN04G3213 Fragaria x ananassa HOM05D036052 ORTHO05D006215 1.2e-08 65.1 70 50.0
FAN09G1413 Fragaria x ananassa HOM05D036052 ORTHO05D006215 2.1e-08 64.3 49 61.2
AL3G40260 Arabidopsis lyrata HOM05D005436 ORTHO05D006215 1.0e-07 62.0 54 55.6
RcHm_v2.0_Chr1g0318701 Rosa chinensis HOM05D005436 ORTHO05D006215 1.3e-07 61.6 56 58.9
Hma1.2p1_0870F.1_g230930 Hydrangea macrophylla HOM05D005436 ORTHO05D006215 1.1e-06 58.5 46 69.6
Zm00001eb344380 Zea mays HOM05D005436 ORTHO05D006215 1.9e-06 57.8 57 47.4


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