Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G242700 Prunus persica HOM05D007686 ORTHO05D009709 1.3e-36 158.7 77 100.0
RcHm_v2.0_Chr4g0432731 Rosa chinensis HOM05D007686 ORTHO05D009709 8.4e-31 139.4 77 84.4
MD13G1103100 Malus domestica HOM05D007686 ORTHO05D009709 4.6e-29 133.7 68 92.6
FAN12G1967 Fragaria x ananassa HOM05D007686 ORTHO05D009709 3.0e-28 131.0 76 78.9
CANSAT01G2773 Cannabis sativa HOM05D007686 ORTHO05D009709 2.5e-27 127.9 77 77.9
Gohir.A04G137000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 7.3e-27 126.3 77 75.3
CiPaw.05G168000 Carya illinoinensis HOM05D007686 ORTHO05D009709 2.8e-26 124.4 77 74.0
Dinv14741 Davidia involucrata HOM05D007686 ORTHO05D009709 1.4e-25 122.1 77 74.0
Gohir.D04G180200 Gossypium hirsutum HOM05D007686 ORTHO05D009709 3.1e-25 120.9 77 71.4
Potri.008G185000 Populus trichocarpa HOM05D007686 ORTHO05D009709 5.2e-25 120.2 77 72.7
TWI18G1075 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 1.5e-24 118.6 77 70.1
arahy.Tifrunner.gnm1.ann1.BXJH78 Arachis hypogaea HOM05D007686 ORTHO05D009709 2.6e-24 117.9 78 67.9
Sabra08G0140000 Salix brachista HOM05D007686 ORTHO05D009709 4.4e-24 117.1 77 71.4
Lalb_Chr07g0185471 Lupinus albus HOM05D007686 ORTHO05D009709 7.6e-24 116.3 78 69.2
SGA_v2.0_scaffold100G29576 Striga asiatica HOM05D007686 ORTHO05D009709 1.3e-23 115.5 77 63.6
PGR119G1810 Punica granatum HOM05D007686 ORTHO05D009709 1.7e-23 115.2 77 70.1
Cpa.g.sc33.48 Carica papaya HOM05D007686 ORTHO05D009709 4.9e-23 113.6 77 68.8
HanXRQChr08g0208401 Helianthus annuus HOM05D007686 ORTHO05D009709 4.9e-23 113.6 77 72.7
MD16G1103300 Malus domestica HOM05D007686 ORTHO05D009709 1.4e-22 112.1 59 89.8
TWI36G0128 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 1.9e-22 111.7 77 64.9
Migut.K00622 Erythranthe guttata HOM05D007686 ORTHO05D009709 5.4e-22 110.2 77 63.6
Thecc.02G263700 Theobroma cacao HOM05D007686 ORTHO05D009709 5.4e-22 110.2 77 64.9
Ciclev10031251m.g Citrus clementina HOM05D007686 ORTHO05D009709 7.1e-22 109.8 77 67.5
Manes.13G022000 Manihot esculenta HOM05D007686 ORTHO05D009709 7.1e-22 109.8 77 63.6
Psat7g058760 Pisum sativum HOM05D007686 ORTHO05D009709 1.2e-21 109.0 78 64.1
CsaV3_5G030960 Cucumis sativus L. HOM05D007686 ORTHO05D009709 1.6e-21 108.6 77 66.2
Manes.13G021400 Manihot esculenta HOM05D007686 ORTHO05D009709 1.6e-21 108.6 77 63.6
Medtr8g089700 Medicago truncatula HOM05D007686 ORTHO05D009709 2.7e-21 107.8 78 64.1
TPR.G6255 Trifolium pratense HOM05D007686 ORTHO05D009709 2.7e-21 107.8 78 65.4
CSS0050065 Camellia sinensis var. sinensis HOM05D007686 ORTHO05D009709 6.0e-21 106.7 62 80.6
Nitab4.5_0001839g0010 Nicotiana tabacum HOM05D007686 ORTHO05D009709 1.7e-20 105.1 60 80.0
Solyc06g008190.1 Solanum lycopersicum HOM05D007686 ORTHO05D009709 3.0e-20 104.4 67 73.1
Sopen06g003050 Solanum pennellii HOM05D007686 ORTHO05D009709 3.0e-20 104.4 67 73.1
DCAR_031167 Daucus carota HOM05D002540 ORTHO05D002672 3.9e-20 104.0 67 70.1
Lj4g0016926 Lotus japonicus HOM05D007686 ORTHO05D009709 3.9e-20 104.0 81 63.0
Sed0013465 Sechium edule HOM05D007686 ORTHO05D009709 3.9e-20 104.0 77 63.6
Eucgr.H02473 Eucalyptus grandis HOM05D007686 ORTHO05D009709 5.1e-20 103.6 76 65.8
Nitab4.5_0000067g0230 Nicotiana tabacum HOM05D007686 ORTHO05D009709 5.1e-20 103.6 59 81.4
ClCG05G025900 Citrullus lanatus HOM05D007686 ORTHO05D009709 6.6e-20 103.2 75 62.7
ECA233G6157 Erigeron canadensis HOM05D007686 ORTHO05D009709 8.7e-20 102.8 78 67.9
Gorai.012G173300 Gossypium raimondii HOM05D007686 ORTHO05D009709 1.5e-19 102.1 66 71.2
Rhsim12G0039200 Rhododendron simsii HOM05D007686 ORTHO05D009709 2.5e-19 101.3 60 80.0
Ca_17785_v3 Cicer arietinum L. HOM05D007686 ORTHO05D009709 7.3e-19 99.8 78 60.3
Lj3P1060G37 Lonicera japonica HOM05D007686 ORTHO05D009709 7.3e-19 99.8 66 71.2
Glyma.08G131100 Glycine max HOM05D007686 ORTHO05D009709 1.3e-18 99.0 79 62.0
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 1.6e-18 98.6 71 64.8
Glyma.05G173932 Glycine max HOM05D007686 ORTHO05D009709 3.6e-18 97.4 79 60.8
Phvul.002G258900 Phaseolus vulgaris HOM05D007686 ORTHO05D009709 3.6e-18 97.4 79 60.8
MSTRG.555 Avicennia marina HOM05D007686 ORTHO05D009709 8.1e-18 96.3 66 65.2
CDE05G1633 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 4.0e-17 94.0 71 60.6
Hma1.2p1_0815F.1_g222720 Hydrangea macrophylla HOM05D007686 ORTHO05D009709 9.0e-17 92.8 60 71.7
GSVIVG01000559001 Vitis vinifera HOM05D007686 ORTHO05D009709 9.0e-17 92.8 59 76.3
QL03p056833 Quercus lobata HOM05D007686 ORTHO05D009709 7.6e-16 89.7 54 77.8
QL93p1848_0021 Quercus lobata HOM05D007686 ORTHO05D009709 7.6e-16 89.7 54 77.8
AUR62011787 Chenopodium quinoa HOM05D007686 ORTHO05D009709 4.9e-15 87.0 66 62.1
FvH4_4g25420 Fragaria vesca HOM05D007686 ORTHO05D009709 2.4e-14 84.7 47 80.9
SHI17831 Sapria himalayana HOM05D007686 ORTHO05D009709 2.4e-14 84.7 77 59.7
COL.COLO4_23488 Corchorus olitorius HOM05D007686 ORTHO05D009709 7.1e-14 83.2 43 81.4
Atru.chr11.2166 Acer truncatum HOM05D007686 ORTHO05D009709 1.1e-11 75.9 53 67.9
EL10Ac7g16785 Beta vulgaris HOM05D007686 ORTHO05D009709 1.9e-11 75.1 62 58.1
PSO724G0460 Papaver somniferum HOM05D007686 ORTHO05D009709 1.9e-11 75.1 55 63.6
Sc06g0009620 Simmondsia chinensis HOM05D007686 ORTHO05D009709 3.3e-11 74.3 56 66.1
PSO135G0590 Papaver somniferum HOM05D007686 ORTHO05D009709 9.6e-11 72.8 54 63.0
Zm00001eb331140 Zea mays HOM05D007686 ORTHO05D009709 2.1e-10 71.6 77 46.8
Gohir.A03G132900 Gossypium hirsutum HOM05D007686 ORTHO05D009709 2.8e-10 71.2 43 72.1
Sp1g11590 Schrenkiella parvula HOM05D007686 ORTHO05D009709 3.7e-10 70.9 53 64.2
Os07g0688100 Oryza sativa ssp. japonica HOM05D007686 ORTHO05D009709 4.8e-10 70.5 77 42.9
AT1G13040 Arabidopsis thaliana HOM05D007686 ORTHO05D009709 6.2e-10 70.1 53 64.2
CARHR013370 Cardamine hirsuta HOM05D007686 ORTHO05D009709 6.2e-10 70.1 51 66.7
PGSC0003DMG400014696 Solanum tuberosum HOM05D007686 ORTHO05D009709 6.2e-10 70.1 43 76.7
AL1G24690 Arabidopsis lyrata HOM05D007686 ORTHO05D009709 1.1e-09 69.3 53 64.2
Carub.0001s1279 Capsella rubella HOM05D007686 ORTHO05D009709 1.1e-09 69.3 53 64.2
BcaC05g25091 Brassica carinata HOM05D007686 ORTHO05D009709 1.8e-09 68.6 51 62.7
A06p08670 Brassica napus HOM05D002540 ORTHO05D002672 1.8e-09 68.6 51 62.7
BolC5t29774H Brassica oleracea HOM05D007686 ORTHO05D009709 1.8e-09 68.6 51 62.7
BraA06t24064Z Brassica rapa HOM05D007686 ORTHO05D009709 1.8e-09 68.6 51 62.7
Aqoxy2G03020 Aquilegia oxysepala HOM05D007686 ORTHO05D009709 2.4e-09 68.2 49 65.3
C08p15790 Brassica napus HOM05D002540 ORTHO05D002672 2.4e-09 68.2 51 64.7
BolC8t49205H Brassica oleracea HOM05D002540 ORTHO05D002672 2.4e-09 68.2 51 64.7
Aa31LG1G1760 Aethionema arabicum HOM05D007686 ORTHO05D009709 3.1e-09 67.8 52 61.5
A08p32500 Brassica napus HOM05D007686 ORTHO05D009709 4.0e-09 67.4 51 64.7
C05p10280 Brassica napus HOM05D002540 ORTHO05D002672 4.0e-09 67.4 51 60.8
BraA08t35174Z Brassica rapa HOM05D007686 ORTHO05D009709 4.0e-09 67.4 51 64.7
Thhalv10007381m.g Eutrema salsugineum HOM05D007686 ORTHO05D009709 4.0e-09 67.4 51 62.7
Lsat_1_v5_gn_8_152860 Lactuca sativa HOM05D007686 ORTHO05D009709 4.0e-09 67.4 43 69.8
THA.LOC104805275 Tarenaya hassleriana HOM05D007686 ORTHO05D009709 4.0e-09 67.4 50 64.0
CAN.G941.2 Capsicum annuum HOM05D007686 ORTHO05D009709 5.3e-09 67.0 164 30.5
HPP92_012781 Vanilla planifolia HOM05D007686 ORTHO05D009709 6.9e-09 66.6 40 75.0
TAR383G0079 Trochodendron aralioides HOM05D007686 ORTHO05D009709 1.5e-08 65.5 47 68.1
Oeu049173.1 Olea europaea HOM05D007686 ORTHO05D009709 2.6e-08 64.7 43 62.8
Gorai.005G176400 Gossypium raimondii HOM05D007686 ORTHO05D009709 4.2e-06 57.4 50 54.0


User provided reference genes

Program Settings