Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 7.8e-230 800.0 387 100.0
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 5.1e-181 637.9 353 86.1
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 7.2e-175 617.5 357 84.3
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.4e-170 603.2 354 83.3
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 6.5e-168 594.3 354 82.2
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.2e-167 592.0 354 82.2
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.3e-164 582.0 342 83.3
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 5.5e-151 538.1 351 74.6
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 1.6e-150 536.6 361 71.5
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 3.6e-150 535.4 353 72.2
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 1.0e-149 533.9 356 72.2
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 8.2e-147 524.2 357 70.9
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 1.0e-144 517.3 356 69.9
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 1.7e-144 516.5 360 70.6
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 3.8e-144 515.4 361 67.9
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 3.8e-144 515.4 360 71.9
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 1.2e-142 510.4 346 72.0
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 4.7e-142 508.4 357 69.7
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 6.1e-142 508.1 347 72.0
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 4.0e-141 505.4 351 68.9
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 3.4e-140 502.3 364 68.7
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 9.8e-140 500.7 355 68.5
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 2.2e-139 499.6 347 71.5
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 3.7e-139 498.8 353 68.8
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 3.7e-139 498.8 352 69.9
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 6.3e-139 498.0 353 70.5
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 2.4e-138 496.1 345 70.7
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 4.1e-138 495.4 363 68.6
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 9.1e-138 494.2 352 68.8
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 9.1e-138 494.2 352 67.9
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 3.5e-137 492.3 356 68.0
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 3.5e-137 492.3 352 68.2
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 7.7e-137 491.1 353 67.7
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 7.7e-137 491.1 339 69.9
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 1.0e-136 490.7 360 66.9
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.3e-136 490.3 352 66.8
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.5e-135 486.9 354 65.8
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.5e-135 486.9 354 65.8
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 3.3e-135 485.7 352 68.8
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 4.2e-135 485.3 440 59.1
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 2.8e-134 482.6 348 67.2
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 2.3e-133 479.6 347 67.1
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 1.5e-132 476.9 351 66.1
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 3.4e-132 475.7 346 66.5
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 9.8e-132 474.2 361 64.8
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 3.7e-131 472.2 353 63.7
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 1.1e-130 470.7 357 66.4
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 1.8e-130 469.9 361 64.3
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 1.8e-130 469.9 334 69.5
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 3.1e-130 469.2 355 64.2
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 5.4e-130 468.4 354 65.8
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 3.8e-128 462.2 354 63.6
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 3.8e-128 462.2 353 62.9
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 1.9e-127 459.9 347 65.4
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 1.9e-127 459.9 340 66.8
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 2.5e-127 459.5 351 65.0
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 3.3e-127 459.1 340 66.2
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 1.6e-126 456.8 338 66.9
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 2.1e-126 456.4 340 66.2
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 6.1e-126 454.9 347 63.4
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 2.3e-125 453.0 349 61.3
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 8.9e-125 451.1 350 63.4
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 3.4e-124 449.1 349 63.9
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 7.5e-124 448.0 354 62.4
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 3.7e-123 445.7 361 62.0
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 4.9e-123 445.3 351 62.4
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 4.9e-123 445.3 342 63.7
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 5.4e-122 441.8 358 62.0
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 4.6e-121 438.7 351 62.4
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 4.6e-121 438.7 401 57.4
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 1.3e-120 437.2 341 64.8
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 5.0e-120 435.3 324 68.2
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 1.5e-119 433.7 349 61.6
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 1.6e-118 430.3 339 63.7
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 2.8e-118 429.5 340 63.2
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 3.6e-118 429.1 354 60.7
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 1.4e-117 427.2 340 64.4
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 1.8e-117 426.8 341 63.3
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 2.3e-117 426.4 341 63.3
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 3.1e-117 426.0 344 61.0
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 2.2e-115 419.9 365 57.5
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 4.7e-110 402.1 341 57.5
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 9.9e-108 394.4 279 71.3
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 8.1e-102 374.8 358 56.1
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 5.4e-98 362.1 325 56.3
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 7.1e-98 361.7 352 52.3
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 1.6e-97 360.5 312 59.9
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 2.5e-95 353.2 341 53.1
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 6.9e-93 345.1 346 51.7
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 2.6e-92 343.2 275 60.4
QL03p056156 Quercus lobata HOM05D006855 ORTHO05D008695 6.6e-88 328.6 228 71.1
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.9e-83 313.2 350 48.0
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.1e-82 311.2 333 48.0
FvH4_4g25240 Fragaria vesca HOM05D006855 ORTHO05D008695 4.3e-79 299.3 176 84.7
Sc11g0000830 Simmondsia chinensis HOM05D006855 ORTHO05D008695 7.4e-79 298.5 210 69.0
Hund25410 Selenicereus undatus HOM05D006855 ORTHO05D008695 1.6e-70 270.8 229 61.6
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.0e-67 261.5 180 71.7
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.8e-67 259.6 155 80.0
SEGI_15055 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 1.6e-65 254.2 215 59.1
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.0e-64 251.5 149 79.2
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 5.1e-64 249.2 178 66.9
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 7.4e-63 245.4 297 44.8
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 9.7e-63 245.0 308 43.5
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 2.6e-60 236.9 238 52.1
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 6.1e-57 225.7 430 34.4
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 3.0e-56 223.4 360 39.2
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 2.0e-55 220.7 152 68.4
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 7.4e-55 218.8 217 54.8
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 1.5e-52 211.1 176 58.0
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.3e-47 193.4 115 77.4
SMO203G0223 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.3e-46 191.4 245 42.0
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.8e-46 190.3 112 77.7
SMO327G0043 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.1e-39 168.3 277 38.6
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.9e-27 127.1 119 52.9
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.0e-24 118.6 134 46.3
ECA233G3820 Erigeron canadensis HOM05D006855 ORTHO05D008695 2.0e-20 104.4 108 53.7
Sabra12G0027400 Salix brachista HOM05D005071 ORTHO05D006069 2.5e-18 97.4 376 25.8
Potri.012G038900 Populus trichocarpa HOM05D005071 ORTHO05D006069 2.1e-17 94.4 376 26.1
Rhsim08G0124200 Rhododendron simsii HOM05D005071 ORTHO05D006069 2.8e-17 94.0 398 25.6
SGA_v2.0_scaffold25G10767 Striga asiatica HOM05D005071 ORTHO05D006069 3.6e-17 93.6 372 26.6
SMO364G0181 Selaginella moellendorffii HOM05D005071 ORTHO05D006069 1.4e-16 91.7 366 24.3
AUR62038575 Chenopodium quinoa HOM05D005071 ORTHO05D006069 1.8e-16 91.3 359 26.2
Os02g0773300 Oryza sativa ssp. japonica HOM05D005071 ORTHO05D006069 8.9e-16 89.0 358 26.5
MCO03G464 Micromonas commoda HOM05D005071 ORTHO05D006069 1.5e-15 88.2 333 27.9
PGSC0003DMG400031041 Solanum tuberosum HOM05D005071 ORTHO05D006069 1.5e-15 88.2 367 23.4
Zm00001eb256470 Zea mays HOM05D005071 ORTHO05D006069 2.0e-15 87.8 365 25.5
MD14G1242800 Malus domestica HOM05D005071 ORTHO05D006069 2.6e-15 87.4 372 24.5
Solyc03g098230.3 Solanum lycopersicum HOM05D005071 ORTHO05D006069 3.4e-15 87.0 368 23.6
Sopen03g028930 Solanum pennellii HOM05D005071 ORTHO05D006069 3.4e-15 87.0 368 23.6
ATR0598G263 Amborella trichopoda HOM05D005071 ORTHO05D006069 4.4e-15 86.7 370 25.9
CAN.G637.11 Capsicum annuum HOM05D005071 ORTHO05D006069 5.7e-15 86.3 371 25.3
HPP92_009318 Vanilla planifolia HOM05D005071 ORTHO05D006069 5.7e-15 86.3 364 26.4
Actinidia06302 Actinidia chinensis HOM05D005071 ORTHO05D006069 7.5e-15 85.9 364 23.6
MELO3C001942.2 Cucumis melo HOM05D005071 ORTHO05D006069 9.8e-15 85.5 344 25.0
CsaV3_1G005050 Cucumis sativus L. HOM05D005071 ORTHO05D006069 9.8e-15 85.5 344 25.0
Pp3c15_20550 Physcomitrium patens HOM05D005071 ORTHO05D006069 9.8e-15 85.5 362 24.3
Sed0005435 Sechium edule HOM05D005071 ORTHO05D006069 9.8e-15 85.5 368 24.5
Migut.O00239 Erythranthe guttata HOM05D005071 ORTHO05D006069 1.3e-14 85.1 360 25.6
Lj5C165T19 Lonicera japonica HOM05D005071 ORTHO05D006069 1.3e-14 85.1 372 25.3
Aqoxy3G04132 Aquilegia oxysepala HOM05D005071 ORTHO05D006069 1.7e-14 84.7 358 24.0
Dinv06025 Davidia involucrata HOM05D005071 ORTHO05D006069 1.7e-14 84.7 376 23.9
Actinidia17702 Actinidia chinensis HOM05D005071 ORTHO05D006069 2.2e-14 84.3 347 24.2
Eucgr.H00596 Eucalyptus grandis HOM05D005071 ORTHO05D006069 2.2e-14 84.3 372 24.2
PGR083G1095 Punica granatum HOM05D005071 ORTHO05D006069 2.8e-14 84.0 372 24.7
Thecc.03G069100 Theobroma cacao HOM05D005071 ORTHO05D006069 3.7e-14 83.6 374 25.1
AUR62042043 Chenopodium quinoa HOM05D005071 ORTHO05D006069 4.9e-14 83.2 332 25.6
Oeu038408.4 Olea europaea HOM05D005071 ORTHO05D006069 6.3e-14 82.8 401 23.4
Sc24g0002670 Simmondsia chinensis HOM05D005071 ORTHO05D006069 8.3e-14 82.4 359 26.2
VMungo0251G2121 Vigna mungo HOM05D005071 ORTHO05D006069 1.1e-13 82.0 346 24.3
Hma1.2p1_0493F.1_g165090 Hydrangea macrophylla HOM05D005071 ORTHO05D006069 2.4e-13 80.9 372 23.4
Phvul.002G332800 Phaseolus vulgaris HOM05D005071 ORTHO05D006069 2.4e-13 80.9 370 24.6
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 4.1e-13 80.1 67 58.2
Gohir.D11G001200 Gossypium hirsutum HOM05D005071 ORTHO05D006069 7.0e-13 79.3 336 25.3
HanXRQChr16g0503311 Helianthus annuus HOM05D005071 ORTHO05D006069 7.0e-13 79.3 360 24.7
Gorai.007G002100 Gossypium raimondii HOM05D005071 ORTHO05D006069 9.2e-13 79.0 336 25.3
Cre07.g319320 Chlamydomonas reinhardtii HOM05D005071 ORTHO05D006069 1.6e-12 78.2 364 25.0
Cre07.g319400 Chlamydomonas reinhardtii HOM05D005071 ORTHO05D006069 1.6e-12 78.2 364 25.0
Gohir.A11G001600 Gossypium hirsutum HOM05D005071 ORTHO05D006069 1.6e-12 78.2 336 25.0
MD06G1235700 Malus domestica HOM05D005071 ORTHO05D006069 3.5e-12 77.0 360 25.8
CDE11G0073 Ceratophyllum demersum HOM05D005071 ORTHO05D006069 4.5e-12 76.6 367 23.2
EL10Ac8g19579 Beta vulgaris HOM05D005071 ORTHO05D006069 6.6e-11 72.8 372 23.7
Sc24g0002660 Simmondsia chinensis HOM05D005071 ORTHO05D006069 1.5e-10 71.6 334 24.9
Ciclev10024301m.g Citrus clementina HOM05D005071 ORTHO05D006069 7.3e-10 69.3 367 23.4
Sabra10G0018700 Salix brachista HOM05D000933 ORTHO05D000820 7.3e-10 69.3 48 62.5
Pp3s30_410 Physcomitrium patens HOM05D005071 ORTHO05D006069 1.6e-09 68.2 337 23.7


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