Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 3.5e-258 894.4 452 100.0
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.2e-229 799.7 451 88.7
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.6e-224 781.9 451 86.9
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.1e-218 762.3 453 83.7
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 1.7e-215 752.7 453 82.1
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 3.7e-207 724.9 450 80.7
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 2.4e-206 722.2 450 79.1
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 1.0e-204 716.8 450 78.4
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 7.3e-203 710.7 450 78.2
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 4.0e-201 704.9 450 77.3
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 3.4e-200 701.8 452 77.2
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 5.7e-200 701.0 517 70.0
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 7.5e-200 700.7 450 76.4
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 3.7e-199 698.4 452 77.4
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 2.4e-198 695.7 449 76.4
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 7.0e-198 694.1 448 77.5
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.2e-197 693.3 448 77.5
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 3.0e-196 688.7 450 75.1
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 1.9e-195 686.0 450 76.2
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 3.3e-195 685.3 449 75.9
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 3.6e-194 681.8 450 74.9
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.2e-194 681.0 450 74.9
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 2.0e-192 676.0 450 74.7
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 9.8e-192 673.7 441 78.5
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 9.8e-192 673.7 451 74.9
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 2.2e-191 672.5 451 75.2
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.1e-190 670.2 450 74.0
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 7.0e-190 667.5 453 74.0
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 1.3e-188 663.3 501 68.5
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.3e-188 662.5 451 73.4
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 3.3e-187 658.7 450 73.3
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 8.1e-186 654.1 451 72.3
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 3.7e-183 645.2 448 70.5
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 1.4e-182 643.3 447 71.8
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 1.6e-181 639.8 450 71.8
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.1e-181 639.4 459 70.2
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 2.1e-181 639.4 450 72.2
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.0e-180 637.1 450 71.1
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.7e-180 636.3 449 69.9
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.7e-180 636.3 449 69.9
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.7e-180 636.3 446 71.7
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 2.3e-180 636.0 462 69.5
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 2.1e-178 629.4 545 62.2
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 4.7e-178 628.2 450 70.7
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 6.2e-178 627.9 446 68.2
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 8.1e-178 627.5 450 70.7
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.2e-176 623.6 447 67.3
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 7.6e-176 620.9 453 67.5
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 9.9e-176 620.5 451 68.5
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.3e-175 620.2 447 66.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 1.4e-174 616.7 453 66.9
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 1.2e-173 613.6 453 68.0
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.7e-173 612.5 448 66.5
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 2.7e-173 612.5 447 66.7
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.5e-171 606.7 450 68.2
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.6e-170 603.2 454 67.6
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.1e-170 602.8 397 75.1
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 9.0e-169 597.4 448 65.0
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 9.0e-169 597.4 453 64.9
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 4.4e-168 595.1 445 64.5
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 5.8e-168 594.7 445 64.5
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 7.6e-168 594.3 447 64.4
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-167 593.6 445 64.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-167 593.6 445 64.3
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.3e-167 593.6 445 64.5
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 1.7e-167 593.2 447 64.2
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.9e-167 592.4 462 64.3
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 3.2e-166 589.0 450 65.1
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 3.5e-165 585.5 450 63.3
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 3.5e-165 585.5 425 67.3
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.7e-164 583.2 449 63.9
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 2.3e-164 582.8 447 62.2
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 2.3e-164 582.8 447 62.2
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 3.9e-164 582.0 447 62.0
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 5.1e-164 581.6 447 62.0
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 8.7e-164 580.9 449 63.5
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 3.3e-163 578.9 448 62.7
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 9.6e-163 577.4 463 66.5
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.3e-162 577.0 424 67.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 2.8e-162 575.9 447 62.0
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.5e-160 568.5 467 60.6
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 4.5e-160 568.5 385 73.8
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.3e-159 567.0 427 64.6
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.4e-158 563.5 450 62.4
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 3.2e-158 562.4 450 59.8
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.2e-157 560.5 424 68.2
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 6.0e-157 558.1 372 73.1
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 3.2e-150 535.8 396 67.4
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 6.0e-149 531.6 382 66.0
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 9.0e-145 517.7 462 57.6
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 7.1e-142 508.1 396 63.6
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 5.7e-139 498.4 460 60.4
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-135 487.6 445 57.5
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.2e-128 464.2 313 70.0
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 3.0e-124 449.5 333 66.7
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 6.1e-117 425.2 297 72.4
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 3.9e-116 422.5 398 52.0
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 4.2e-110 402.5 310 63.9
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 8.8e-100 368.2 312 60.6
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.8e-89 334.0 247 68.0
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.8e-89 334.0 247 68.0
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 5.2e-84 315.8 462 40.0
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 1.9e-73 280.8 352 43.5
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 4.0e-68 263.1 215 60.5
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.2e-67 261.5 209 63.2
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 2.7e-64 250.4 184 66.8
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 2.6e-35 154.1 107 73.8
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.4e-20 105.1 95 55.8
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 4.3e-14 83.6 68 63.2
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.3e-13 82.0 68 61.8
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.7e-10 71.6 80 48.8


User provided reference genes

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