Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-40 168.7 85 100.0
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-19 99.0 55 87.3
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 2.5e-19 98.6 61 80.3
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-18 96.3 55 85.5
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 3.5e-18 94.7 57 80.7
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 4.6e-18 94.4 57 82.5
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 1.8e-17 92.4 55 83.6
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 3.0e-17 91.7 55 81.8
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 5.1e-17 90.9 55 81.8
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 5.1e-17 90.9 55 80.0
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 5.1e-17 90.9 55 81.8
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 6.7e-17 90.5 55 81.8
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 1.1e-16 89.7 56 78.6
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.1e-16 89.7 55 80.0
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 1.9e-16 89.0 55 80.0
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 7.4e-16 87.0 55 80.0
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 7.4e-16 87.0 56 78.6
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 9.7e-16 86.7 55 78.2
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.8e-15 85.1 55 78.2
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 8.2e-15 83.6 56 73.2
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 9.0e-14 80.1 55 72.7
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 9.0e-14 80.1 55 72.7
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 9.0e-14 80.1 55 72.7
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.2e-13 79.7 55 74.5
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-13 79.7 55 74.5
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 1.5e-13 79.3 48 75.0
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 1.5e-13 79.3 52 75.0
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 2.0e-13 79.0 55 69.1
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.5e-13 77.8 55 70.9
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.5e-13 77.8 55 70.9
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 7.7e-13 77.0 55 72.7
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 1.0e-12 76.6 50 74.0
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 1.7e-12 75.9 53 69.8
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 2.2e-12 75.5 83 53.0
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.9e-12 75.1 55 70.9
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 8.5e-12 73.6 56 73.2
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.5e-11 72.0 49 67.3
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 5.5e-11 70.9 53 66.0
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 7.2e-11 70.5 55 65.5
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 1.6e-10 69.3 43 74.4
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 2.1e-10 68.9 53 64.2
Potri.008G047850 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.7e-10 68.6 62 61.3
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 4.6e-10 67.8 53 62.3
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 2.3e-09 65.5 53 69.8
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 2.5e-08 62.0 38 81.6
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 3.3e-08 61.6 53 62.3
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.3e-07 59.7 51 64.7
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.7e-07 59.3 39 76.9
Manes.06G038352 Manihot esculenta HOM05D007671 ORTHO05D009777 3.7e-07 58.2 58 58.6
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 8.2e-07 57.0 35 74.3
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 8.2e-07 57.0 41 63.4
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.4e-06 56.2 35 71.4
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 3.1e-06 55.1 35 68.6
Os07g0661450 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 9.1e-06 53.5 35 68.6


User provided reference genes

Program Settings