Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 2.8e-161 572.0 313 100.0
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 5.7e-98 361.7 306 64.1
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 8.0e-92 341.3 299 69.6
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 2.1e-55 220.3 351 45.6
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 7.8e-55 218.4 325 47.7
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 2.3e-54 216.9 351 45.9
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 4.4e-50 202.6 346 40.5
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 9.9e-50 201.4 303 49.5
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 6.0e-47 192.2 328 38.7
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.7e-41 174.1 320 39.1
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 2.2e-41 173.7 301 37.5
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 1.0e-38 164.9 271 39.9
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.8e-38 164.1 316 38.6
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 9.6e-37 158.3 329 34.7
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.8e-35 154.1 290 38.6
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 4.0e-35 152.9 317 35.3
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.2e-34 151.4 221 42.5
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 2.0e-34 150.6 245 40.8
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 4.5e-34 149.4 313 34.8
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 5.8e-34 149.1 345 33.3
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 1.7e-33 147.5 235 40.4
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 2.9e-33 146.7 327 34.3
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 3.8e-33 146.4 181 47.5
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 1.1e-32 144.8 167 46.7
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.1e-32 144.8 167 48.5
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.1e-32 144.8 167 48.5
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 1.4e-32 144.4 355 33.5
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 3.2e-32 143.3 186 44.6
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 4.2e-32 142.9 321 34.9
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 6.0e-31 139.0 309 35.9
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 3.9e-30 136.3 302 34.4
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 8.7e-30 135.2 239 36.8
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 1.1e-29 134.8 291 34.0
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.9e-29 134.0 167 43.1
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 2.5e-29 133.7 184 41.8
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.5e-29 133.7 167 43.1
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 7.4e-29 132.1 297 34.0
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 7.4e-29 132.1 185 41.6
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.6e-28 131.0 235 38.3
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 2.1e-28 130.6 152 46.1
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 1.1e-27 128.3 233 38.6
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.8e-27 127.5 274 33.9
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 6.9e-27 125.6 186 39.2
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 9.0e-27 125.2 189 40.2
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 9.0e-27 125.2 162 43.2
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 9.0e-27 125.2 162 43.2
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 9.0e-27 125.2 156 44.2
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 3.4e-26 123.2 239 34.3
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 3.4e-26 123.2 235 36.6
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 1.0e-25 121.7 301 30.9
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 2.2e-25 120.6 221 34.8
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 3.8e-25 119.8 285 32.6
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 4.9e-25 119.4 266 31.6
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 4.9e-25 119.4 222 33.8
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 6.5e-25 119.0 193 38.3
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 5.5e-24 115.9 156 45.5
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 7.1e-24 115.5 170 38.8
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 4.6e-23 112.8 297 33.3
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 3.9e-22 109.8 309 31.4
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 6.7e-22 109.0 193 33.7
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.5e-21 107.8 304 30.9
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.5e-21 107.8 304 30.9
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 2.5e-21 107.1 161 39.8
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 5.7e-21 105.9 290 30.7
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.3e-20 104.8 289 30.8
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 2.8e-20 103.6 136 41.2
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 1.4e-19 101.3 285 29.8
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 5.3e-19 99.4 173 33.5
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 5.3e-19 99.4 158 36.7
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 6.9e-19 99.0 289 33.2
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 2.0e-18 97.4 296 28.0
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 7.7e-18 95.5 160 36.2
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 2.2e-17 94.0 225 32.4
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 2.9e-17 93.6 159 36.5
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 3.8e-17 93.2 159 36.5
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 6.5e-17 92.4 163 37.4
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 6.5e-17 92.4 163 37.4
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 8.5e-17 92.0 199 33.2
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.9e-16 90.9 300 28.3
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.9e-16 90.9 132 39.4
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 2.5e-16 90.5 159 35.2
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 2.5e-16 90.5 179 34.6
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 4.2e-16 89.7 199 31.7
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 9.4e-16 88.6 293 28.7
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 2.7e-15 87.0 225 30.2
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.4e-14 84.7 111 40.5
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 3.3e-13 80.1 197 31.5
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 3.3e-13 80.1 201 32.3
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 3.3e-13 80.1 197 31.5
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 7.4e-13 79.0 112 41.1
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 1.7e-12 77.8 197 30.5
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 1.7e-12 77.8 197 30.5
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 1.7e-12 77.8 106 42.5
FAN17G1051 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.1e-11 75.1 219 38.8
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.1e-11 75.1 127 32.3
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 1.8e-11 74.3 147 37.4
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 2.4e-11 73.9 159 30.2
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 6.9e-11 72.4 257 28.0
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 2.7e-07 60.5 70 42.9
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 1.4e-06 58.2 65 40.0


User provided reference genes

Program Settings