Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 4.3e-242 840.9 422 100.0
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 9.8e-210 733.4 453 83.0
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.7e-201 706.1 452 79.0
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 3.7e-201 704.9 450 78.7
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.1e-200 703.4 447 79.2
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.9e-197 692.6 453 78.1
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 3.3e-197 691.8 451 78.3
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.1e-196 689.1 452 77.7
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 2.1e-196 689.1 446 77.6
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 4.7e-196 688.0 452 77.2
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 8.0e-196 687.2 452 77.0
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 2.3e-195 685.6 451 78.0
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.0e-194 682.6 451 77.6
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 3.4e-194 681.8 446 76.2
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 3.4e-194 681.8 477 73.2
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 5.7e-194 681.0 453 75.9
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 7.5e-194 680.6 447 76.3
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 9.8e-194 680.2 451 77.6
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.7e-193 679.5 451 77.4
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.7e-193 679.5 450 76.0
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.2e-193 679.1 453 75.5
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.2e-193 679.1 450 76.4
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.2e-193 679.1 448 76.6
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.9e-193 678.7 447 77.2
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.7e-193 678.3 453 75.7
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.4e-193 677.6 451 75.2
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 6.4e-193 677.6 447 77.0
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 5.4e-192 674.5 453 76.2
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 9.2e-192 673.7 448 76.3
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.2e-191 673.3 446 76.7
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 2.0e-191 672.5 448 75.9
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 3.5e-191 671.8 448 75.2
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 5.0e-190 667.9 451 75.8
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.1e-189 666.8 453 75.9
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.7e-188 661.4 452 73.5
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 4.7e-188 661.4 458 73.4
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 4.7e-188 661.4 477 72.5
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.1e-187 660.2 460 73.9
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.4e-187 659.8 437 75.3
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.8e-187 659.4 448 74.3
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 6.8e-187 657.5 458 72.5
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.2e-186 656.8 457 74.0
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 9.8e-186 653.7 450 73.6
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.3e-185 653.3 453 71.7
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.3e-185 653.3 416 78.4
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.7e-185 651.7 428 76.2
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 3.7e-185 651.7 456 73.5
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 3.7e-185 651.7 452 71.9
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 4.9e-185 651.4 453 71.7
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 6.4e-185 651.0 457 73.3
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 3.2e-184 648.7 442 72.4
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.2e-183 646.7 442 72.9
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 1.6e-183 646.4 483 67.9
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.0e-183 646.0 449 72.6
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 2.7e-183 645.6 452 69.7
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 6.0e-183 644.4 455 72.5
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 6.0e-183 644.4 430 75.8
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 6.6e-182 641.0 451 70.3
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 8.6e-182 640.6 452 69.0
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 8.6e-182 640.6 449 71.0
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 5.6e-181 637.9 452 69.2
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.6e-180 636.3 452 69.0
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 8.1e-180 634.0 469 68.7
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.8e-179 632.9 457 68.1
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 5.2e-179 631.3 452 69.0
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 6.8e-179 630.9 449 72.4
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 8.9e-179 630.6 446 69.5
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.2e-178 630.2 446 69.7
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.5e-178 629.8 453 70.0
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 4.4e-178 628.2 471 66.5
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 5.8e-178 627.9 452 68.1
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 9.9e-178 627.1 437 71.9
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 2.2e-177 625.9 440 70.0
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.9e-177 625.5 451 68.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 6.4e-177 624.4 452 68.4
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 8.3e-177 624.0 452 67.9
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 8.3e-177 624.0 463 67.4
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 8.3e-177 624.0 452 67.9
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 2.4e-176 622.5 453 69.5
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 5.4e-176 621.3 437 70.7
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.6e-175 619.8 435 71.0
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 2.1e-175 619.4 457 67.0
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 6.0e-175 617.8 446 68.8
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 4.3e-173 611.7 472 64.8
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.8e-172 609.0 481 63.8
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 8.1e-172 607.4 448 68.1
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 3.1e-171 605.5 416 73.3
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.2e-170 603.6 484 66.9
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 9.9e-170 600.5 456 68.9
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.1e-168 597.0 498 65.1
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 4.6e-167 591.7 463 66.7
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 9.6e-165 583.9 429 65.7
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.4e-163 580.1 412 70.9
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 4.0e-163 578.6 447 66.2
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 6.9e-163 577.8 479 62.0
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 3.8e-161 572.0 406 72.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 2.1e-159 566.2 388 70.9
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 5.1e-158 561.6 378 77.0
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 5.1e-158 561.6 409 71.1
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 7.3e-157 557.8 412 67.0
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.0e-150 537.3 467 61.2
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 2.5e-149 532.7 457 60.4
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 5.6e-149 531.6 448 61.6
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 5.3e-147 525.0 437 59.3
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 3.1e-139 499.2 433 57.3
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 4.0e-139 498.8 430 55.8
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 6.7e-134 481.5 436 54.8
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 1.1e-133 480.7 426 57.0
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.5e-133 479.6 322 74.8
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 9.7e-117 424.5 454 54.0
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.9e-113 412.9 279 72.8
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.8e-108 396.4 426 54.9
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 2.3e-102 376.7 434 42.4
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-98 364.4 306 66.3
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 5.0e-97 359.0 424 45.3
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 5.4e-83 312.4 367 51.0
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.1e-75 288.1 486 35.8
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.3e-70 270.4 307 51.8
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.0e-69 267.3 177 75.1
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.9e-59 234.2 188 68.6
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 2.9e-52 210.3 104 91.3
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 6.9e-46 189.1 339 41.0
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.5e-45 188.0 122 79.5
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 9.9e-45 185.3 360 36.9
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.3e-41 174.9 124 74.2
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.1e-30 138.7 100 67.0
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 9.0e-30 135.6 85 68.2
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 5.5e-27 126.3 127 50.4
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 2.3e-25 120.9 76 76.3
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 8.2e-23 112.5 83 66.3
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.1e-22 110.5 137 48.9
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 1.5e-21 108.2 67 68.7
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 2.9e-20 104.0 67 74.6
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 8.4e-20 102.4 104 54.8
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 4.2e-19 100.1 101 57.4
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 3.0e-17 94.0 178 30.9
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 6.7e-17 92.8 73 63.0
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 6.9e-14 82.8 62 67.7


User provided reference genes

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