Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 8.6e-207 723.4 358 100.0
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.3e-188 662.1 358 92.7
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 6.4e-170 600.9 362 83.4
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.3e-167 593.2 364 82.4
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 1.5e-166 589.7 363 82.1
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.5e-166 589.7 363 82.1
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.3e-166 588.6 364 81.9
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.7e-162 576.2 359 80.5
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 3.5e-160 568.5 360 79.7
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 3.7e-157 558.5 363 76.9
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 2.4e-156 555.8 361 75.6
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 6.9e-156 554.3 365 76.2
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.5e-155 553.1 362 76.5
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 2.2e-154 549.3 363 74.4
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 4.2e-153 545.0 362 76.5
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 7.1e-153 544.3 366 74.9
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 9.3e-153 543.9 360 74.2
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.7e-152 542.3 360 74.2
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 2.7e-152 542.3 360 74.4
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 3.5e-152 542.0 364 75.5
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 1.3e-151 540.0 361 75.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.1e-150 537.0 366 74.6
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 1.9e-150 536.2 369 75.1
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 1.9e-150 536.2 362 75.1
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 3.3e-150 535.4 374 73.0
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 9.6e-150 533.9 358 74.0
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.1e-149 532.7 364 75.3
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.1e-149 532.7 364 75.3
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 3.7e-149 531.9 364 74.5
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 6.2e-149 531.2 363 73.6
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 2.0e-147 526.2 373 72.7
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 3.4e-147 525.4 358 72.6
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 5.8e-147 524.6 358 73.2
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 5.8e-147 524.6 374 70.9
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 7.6e-147 524.2 373 72.4
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.0e-146 523.9 372 72.0
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 1.7e-146 523.1 370 71.9
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.7e-146 523.1 360 73.3
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 2.2e-146 522.7 367 73.3
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.9e-146 522.3 374 71.7
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 3.8e-146 521.9 358 72.6
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 6.5e-146 521.2 373 71.3
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 6.5e-146 521.2 359 73.8
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.2e-145 518.5 364 73.4
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 9.3e-145 517.3 361 73.4
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.6e-144 516.5 372 71.2
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 2.1e-144 516.2 364 71.4
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 2.1e-144 516.2 360 73.1
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 2.7e-144 515.8 360 72.5
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 6.0e-144 514.6 371 71.4
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 7.9e-144 514.2 374 70.9
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 7.9e-144 514.2 360 71.9
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.0e-143 513.8 367 72.8
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 1.3e-143 513.5 376 71.3
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 1.3e-143 513.5 376 71.3
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 2.3e-143 512.7 368 70.4
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 3.0e-143 512.3 365 71.5
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 6.7e-143 511.1 374 70.9
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 8.7e-143 510.8 374 70.3
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 8.7e-143 510.8 374 70.3
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.1e-142 510.4 362 71.0
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 2.5e-142 509.2 369 72.1
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 3.3e-142 508.8 359 70.8
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 1.6e-141 506.5 331 77.3
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 4.8e-141 505.0 361 70.4
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.1e-140 503.8 350 73.7
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 2.4e-140 502.7 362 69.3
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 2.4e-140 502.7 358 71.2
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 6.9e-140 501.1 365 69.6
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.5e-139 500.0 359 69.6
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 1.0e-138 497.3 377 68.2
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 2.2e-138 496.1 358 67.3
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 5.0e-138 495.0 370 67.0
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 1.9e-137 493.0 358 69.6
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 9.3e-137 490.7 372 66.7
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.6e-136 490.0 360 68.9
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 3.6e-136 488.8 358 68.4
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 7.9e-136 487.6 367 67.0
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 7.9e-136 487.6 367 67.0
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 1.3e-135 486.9 357 68.3
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.9e-135 485.3 367 66.8
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.1e-134 483.8 328 72.6
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 4.3e-134 481.9 446 59.6
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 5.7e-134 481.5 362 68.2
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.8e-133 479.2 358 66.8
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.1e-132 477.2 375 67.2
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 3.1e-132 475.7 361 67.6
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.5e-131 473.4 362 66.6
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 1.5e-131 473.4 362 68.0
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.5e-131 471.9 329 71.7
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 5.9e-131 471.5 335 72.8
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 3.2e-129 465.7 362 66.3
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 2.3e-127 459.5 368 63.9
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 4.4e-126 455.3 333 71.2
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 3.7e-125 452.2 362 64.4
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 4.5e-123 445.3 359 63.0
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 7.7e-123 444.5 362 63.0
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 7.7e-123 444.5 372 61.6
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 3.8e-122 442.2 365 62.2
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 3.8e-122 442.2 375 61.1
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 2.1e-120 436.4 340 65.6
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 6.1e-120 434.9 358 62.8
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 2.3e-119 433.0 358 60.6
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 5.2e-119 431.8 291 75.6
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 5.3e-116 421.8 370 59.5
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 9.1e-116 421.0 293 75.4
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 9.1e-116 421.0 367 58.9
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 8.5e-114 414.5 300 73.7
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.5e-113 413.7 307 64.5
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.0e-107 393.3 348 58.3
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 3.8e-106 389.0 328 61.6
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.1e-105 387.5 359 56.8
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 1.1e-105 387.5 362 57.5
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.1e-105 387.5 314 61.8
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.3e-101 374.0 358 55.3
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 1.1e-100 370.9 194 89.2
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 2.1e-96 356.7 357 52.1
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 3.6e-96 355.9 194 83.5
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 1.8e-95 353.6 347 54.8
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.3e-95 353.2 228 74.6
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 5.2e-95 352.1 341 54.0
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.0e-94 350.1 194 84.5
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.3e-93 347.4 363 51.8
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.7e-93 347.1 315 57.8
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 4.5e-91 339.0 307 53.4
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 1.9e-68 263.8 153 81.7
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.4e-62 242.7 126 88.1
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 1.1e-60 238.0 210 59.0
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 4.6e-51 206.1 214 53.7
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.4e-47 194.5 100 90.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 2.4e-44 183.7 192 53.6
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.1e-44 182.2 90 90.0
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 3.5e-43 179.9 158 64.6
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.9e-36 157.5 229 46.7
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 7.6e-30 135.6 103 68.9
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 2.5e-28 130.6 163 49.1
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 9.3e-28 128.6 142 53.5
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 1.2e-27 128.3 73 78.1
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 2.1e-27 127.5 73 78.1
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.8e-26 124.4 88 69.3
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 5.9e-14 82.8 138 39.1
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 1.1e-12 78.6 43 81.4
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 3.1e-07 60.5 72 51.4


User provided reference genes

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