Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 2.8e-94 349.0 232 100.0
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 5.2e-56 221.9 238 70.2
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 3.1e-48 196.1 232 59.5
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 7.4e-42 174.9 250 57.6
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 4.9e-38 162.2 239 50.6
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 9.3e-37 157.9 239 56.9
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 2.1e-36 156.8 249 45.0
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 9.6e-34 147.9 245 38.8
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.6e-33 147.1 229 55.5
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 3.1e-32 142.9 250 40.8
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 3.8e-30 136.0 234 48.3
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 9.3e-29 131.3 235 46.8
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.6e-28 130.6 244 47.5
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.3e-27 126.7 237 35.9
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 2.3e-27 126.7 233 37.3
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 7.4e-26 121.7 247 39.7
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 2.2e-25 120.2 225 35.6
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 6.3e-25 118.6 223 42.2
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 9.0e-24 114.8 237 40.1
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 4.5e-23 112.5 137 47.4
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.0e-22 111.3 230 35.2
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.7e-22 110.5 233 42.5
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.9e-22 109.8 128 50.8
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 8.5e-22 108.2 218 42.2
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 4.2e-21 105.9 190 48.4
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 2.7e-20 103.2 228 34.6
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.7e-20 103.2 230 36.1
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 2.7e-20 103.2 229 34.5
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 8.8e-19 98.2 233 33.0
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.5e-18 97.4 234 39.3
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 1.9e-18 97.1 229 33.6
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.3e-18 95.9 219 32.0
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 7.4e-18 95.1 233 32.2
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.3e-17 94.4 230 33.9
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 2.2e-17 93.6 182 48.4
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.2e-17 93.6 223 31.8
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.8e-17 93.2 115 46.1
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 6.3e-17 92.0 115 45.2
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.1e-16 91.3 115 44.3
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 2.4e-16 90.1 234 32.9
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 4.1e-16 89.4 223 32.7
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 4.1e-16 89.4 236 33.5
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.2e-15 87.8 245 48.2
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.2e-15 87.8 223 31.4
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 1.3e-14 84.3 239 34.3
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 3.8e-14 82.8 226 32.7
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 3.8e-14 82.8 226 32.7
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.0e-14 82.4 227 30.4
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 8.5e-14 81.6 229 27.9
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.4e-13 80.9 240 30.0
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.5e-13 80.1 227 30.4
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 3.2e-13 79.7 218 29.8
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 5.5e-13 79.0 233 30.0
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.6e-12 77.4 227 30.0
Sabra01G0042900 Salix brachista HOM05D007269 ORTHO05D008531 1.6e-12 77.4 88 48.9
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 3.6e-12 76.3 220 28.6
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 6.1e-12 75.5 274 28.8
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 7.9e-12 75.1 240 29.6
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 7.9e-12 75.1 131 36.6
PSO017G1627 Papaver somniferum HOM05D007269 ORTHO05D008531 7.9e-12 75.1 177 32.2
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.4e-11 74.3 231 26.4
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 2.3e-11 73.6 182 33.5
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 3.0e-11 73.2 231 27.3
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 3.9e-11 72.8 92 42.4
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 5.1e-11 72.4 126 38.1
TWI18G0336 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.1e-10 71.2 146 38.4
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 1.5e-10 70.9 239 27.2
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.0e-10 70.5 110 38.2
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 3.3e-10 69.7 233 30.5
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.3e-10 69.7 231 27.3
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 3.3e-10 69.7 226 28.3
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 4.4e-10 69.3 150 32.0
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 9.7e-10 68.2 98 38.8
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 9.7e-10 68.2 122 34.4
MELO3C022330.2 Cucumis melo HOM05D026927 ORTHO05D008531 2.2e-09 67.0 236 30.1
Os01g0924200 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 2.8e-09 66.6 122 37.7
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 6.3e-09 65.5 235 26.8
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 2.4e-08 63.5 133 32.3
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.4e-08 63.5 231 26.8
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.4e-08 63.5 133 32.3
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.4e-08 63.5 133 32.3
TAR629G3154 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.4e-08 63.5 146 43.8
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 4.1e-08 62.8 137 32.8
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 9.1e-08 61.6 96 35.4
ClCG06G002000 Citrullus lanatus HOM05D026927 ORTHO05D008531 1.5e-07 60.8 158 32.9
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.5e-07 60.8 133 31.6
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 2.0e-07 60.5 104 29.8
MBI07_g27870_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 3.4e-07 59.7 99 38.4
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.0e-06 58.2 229 26.2
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.0e-06 58.2 129 30.2
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.3e-06 57.8 233 26.2
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 1.3e-06 57.8 104 29.8
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 1.7e-06 57.4 127 34.6
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 2.2e-06 57.0 232 23.7
Sed0005097 Sechium edule HOM05D026927 ORTHO05D008531 3.8e-06 56.2 219 32.0


User provided reference genes

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