Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 7.4e-275 949.9 473 100.0
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.0e-252 876.3 464 93.5
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 2.5e-238 828.6 473 85.8
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 6.2e-237 823.9 473 84.6
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.6e-232 807.7 503 79.3
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.3e-231 806.2 503 79.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.6e-230 800.8 506 78.9
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 2.8e-229 798.5 469 82.9
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.4e-225 786.2 463 82.5
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 3.0e-223 778.5 473 80.5
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 1.1e-222 776.5 473 79.1
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 3.3e-222 775.0 470 78.7
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 7.3e-222 773.9 461 81.3
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 3.6e-221 771.5 469 81.0
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 4.7e-221 771.2 464 80.4
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.1e-220 770.0 476 79.2
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 1.1e-220 770.0 461 82.0
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 3.1e-220 768.5 466 79.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 5.2e-220 767.7 469 79.3
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 8.9e-220 766.9 460 80.2
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 8.9e-220 766.9 461 78.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 1.7e-218 762.7 465 79.4
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.7e-218 762.7 473 77.2
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.9e-218 761.9 460 79.3
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 4.1e-217 758.1 461 77.9
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 7.1e-217 757.3 463 78.2
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.7e-215 752.7 493 74.8
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.3e-215 752.3 466 78.3
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.1e-214 750.0 462 78.4
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.9e-214 749.2 472 77.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.6e-213 746.1 470 76.2
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.8e-213 745.3 463 77.1
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 3.6e-213 745.0 464 77.4
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 8.1e-213 743.8 472 75.6
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.1e-212 743.4 507 73.2
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.4e-212 743.0 473 75.7
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 5.2e-212 741.1 464 75.4
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 8.9e-212 740.3 474 74.5
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 1.5e-211 739.6 460 76.7
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 4.4e-211 738.0 473 76.1
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.7e-210 736.1 463 76.0
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.2e-210 735.7 474 74.5
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 2.9e-210 735.3 505 73.1
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 4.9e-210 734.6 467 75.8
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 8.4e-210 733.8 470 74.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 1.0e-207 726.9 556 66.9
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 6.6e-207 724.2 495 72.1
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.9e-206 722.6 463 74.5
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 8.1e-205 717.2 466 75.1
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.0e-203 712.6 464 74.8
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 5.8e-203 711.1 469 72.9
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 3.0e-199 698.7 461 73.1
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.5e-198 695.7 546 64.3
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.1e-196 688.7 461 70.9
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.2e-192 676.8 472 70.6
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.6e-192 676.4 473 70.2
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 4.6e-192 674.9 498 65.9
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 4.3e-190 668.3 402 79.4
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 4.3e-190 668.3 393 82.4
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.3e-189 666.8 468 71.2
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 8.2e-189 664.1 462 67.7
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 3.4e-187 658.7 462 67.5
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 9.3e-185 650.6 459 66.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 5.1e-183 644.8 409 74.3
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 5.1e-183 644.8 409 74.3
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 5.7e-182 641.3 469 68.9
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.6e-181 639.8 378 81.5
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.6e-181 639.8 467 66.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.2e-179 633.6 406 73.9
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.1e-176 622.9 417 72.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.7e-173 613.2 365 81.9
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 3.1e-172 609.0 466 64.8
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 5.3e-172 608.2 473 65.3
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 3.4e-171 605.5 492 63.8
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 9.4e-169 597.4 386 75.1
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.1e-161 573.9 471 62.2
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.3e-157 560.5 332 81.3
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 3.7e-157 558.9 332 81.3
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.3e-150 535.8 368 71.5
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 6.1e-144 515.0 368 71.7
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 4.1e-124 449.1 267 79.4
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.1e-103 381.3 229 79.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 1.6e-72 277.7 167 79.6
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 6.5e-69 265.8 445 32.8
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 3.5e-67 260.0 159 83.0
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 3.0e-66 256.9 235 63.4
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.7e-61 241.1 155 75.5
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 6.5e-45 186.0 119 73.9
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.7e-29 134.8 430 26.5
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.4e-23 115.2 77 71.4
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 2.9e-21 107.5 388 26.8
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 6.1e-19 99.8 337 27.3
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 8.0e-19 99.4 58 86.2
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 9.2e-15 85.9 406 24.4
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 7.5e-09 66.2 58 51.7
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 1.6e-06 58.5 399 24.1
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 2.7e-06 57.8 405 23.2
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 3.5e-06 57.4 259 27.0


User provided reference genes

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