Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 4.6e-36 154.1 80 100.0
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 2.0e-31 138.7 80 92.5
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 5.9e-31 137.1 80 91.2
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 7.2e-29 130.2 80 83.8
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 2.7e-28 128.3 78 82.1
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.0e-27 126.3 78 80.8
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 1.4e-27 125.9 73 87.7
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 3.0e-27 124.8 77 80.5
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 5.1e-27 124.0 73 87.7
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 5.1e-27 124.0 73 87.7
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 5.1e-27 124.0 73 87.7
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 5.1e-27 124.0 73 87.7
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 6.7e-27 123.6 78 78.2
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 8.8e-27 123.2 73 82.2
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 8.8e-27 123.2 77 79.2
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 1.1e-26 122.9 74 82.4
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 2.0e-26 122.1 78 79.5
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 2.5e-26 121.7 79 78.5
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 3.3e-26 121.3 79 75.9
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 5.7e-26 120.6 75 80.0
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 9.7e-26 119.8 74 81.1
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 1.3e-25 119.4 78 78.2
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.7e-25 117.9 69 84.1
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 4.8e-25 117.5 77 77.9
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 4.8e-25 117.5 72 79.2
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 6.3e-25 117.1 78 75.6
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 6.3e-25 117.1 77 74.0
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 6.3e-25 117.1 64 85.9
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 6.3e-25 117.1 74 77.0
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 8.2e-25 116.7 74 79.7
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.1e-24 116.3 72 80.6
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.1e-24 116.3 71 80.3
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-24 116.3 68 83.8
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-24 116.3 69 82.6
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 1.4e-24 115.9 75 78.7
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 1.4e-24 115.9 76 75.0
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 1.4e-24 115.9 75 78.7
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 1.8e-24 115.5 72 79.2
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 5.3e-24 114.0 73 80.8
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 9.1e-24 113.2 67 82.1
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 1.2e-23 112.8 77 74.0
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.2e-23 112.8 76 73.7
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 2.6e-23 111.7 65 81.5
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.6e-23 111.7 72 77.8
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 3.4e-23 111.3 72 75.0
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 1.3e-22 109.4 76 71.1
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 2.9e-22 108.2 77 71.4
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 2.9e-22 108.2 69 78.3
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 3.8e-22 107.8 63 84.1
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 3.8e-22 107.8 66 80.3
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 3.8e-22 107.8 77 74.0
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 5.0e-22 107.5 74 73.0
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 5.0e-22 107.5 74 77.0
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 6.5e-22 107.1 77 72.7
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 6.5e-22 107.1 77 68.8
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 8.5e-22 106.7 75 70.7
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 8.5e-22 106.7 69 78.3
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 8.5e-22 106.7 60 83.3
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 1.4e-21 105.9 67 74.6
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.4e-21 105.9 67 77.6
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 1.4e-21 105.9 77 70.1
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 1.4e-21 105.9 72 76.4
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.9e-21 105.5 77 67.5
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.9e-21 105.5 62 82.3
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 2.5e-21 105.1 72 72.2
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 2.5e-21 105.1 61 83.6
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 2.5e-21 105.1 78 70.5
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 3.2e-21 104.8 62 82.3
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 5.5e-21 104.0 64 78.1
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 5.5e-21 104.0 111 55.0
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 9.4e-21 103.2 64 78.1
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 1.2e-20 102.8 76 73.7
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 1.2e-20 102.8 66 74.2
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 1.2e-20 102.8 64 76.6
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 1.2e-20 102.8 66 74.2
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 1.2e-20 102.8 66 74.2
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 1.2e-20 102.8 66 74.2
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 1.6e-20 102.4 66 74.2
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 2.1e-20 102.1 70 77.1
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 3.6e-20 101.3 72 70.8
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 3.6e-20 101.3 72 70.8
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 3.6e-20 101.3 72 70.8
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 4.7e-20 100.9 76 68.4
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 4.7e-20 100.9 58 81.0
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 6.1e-20 100.5 52 88.5
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 7.9e-20 100.1 55 85.5
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 5.1e-19 97.4 70 67.1
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 3.3e-18 94.7 49 91.8
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 3.3e-18 94.7 68 64.7
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 4.4e-18 94.4 70 65.7
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 7.4e-18 93.6 69 71.0
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 7.4e-18 93.6 61 78.7
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 9.7e-18 93.2 62 74.2
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.3e-17 92.8 44 97.7
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 3.7e-17 91.3 49 87.8
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 3.7e-17 91.3 65 66.2
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 4.8e-17 90.9 105 51.4
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 6.3e-17 90.5 44 95.5
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.8e-16 89.0 74 66.2
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 3.1e-16 88.2 70 67.1
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 5.3e-16 87.4 42 95.2
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 9.1e-16 86.7 44 88.6
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 9.1e-16 86.7 76 60.5
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 4.5e-15 84.3 71 63.4
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 5.9e-15 84.0 44 86.4
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 2.2e-14 82.0 61 70.5
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.2e-13 78.2 53 73.6
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 5.5e-13 77.4 64 65.6
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.7e-12 75.1 37 94.6
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.3e-10 68.2 46 67.4
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 4.8e-09 64.3 34 82.4
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 4.8e-09 64.3 34 82.4
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 8.2e-09 63.5 30 90.0
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 1.8e-08 62.4 67 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 2.9e-06 55.1 52 55.8
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 2.9e-06 55.1 57 54.4


User provided reference genes

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