Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G215200 Prunus persica HOM05D033489 ORTHO05D000309 4.4e-55 217.6 102 100.0
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-11 72.4 91 36.3
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.9e-11 71.6 75 45.3
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.0e-11 71.2 91 35.2
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.0e-11 71.2 75 45.3
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.6e-11 70.9 75 44.0
Hma1.2p1_0787F.1_g217983 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-10 69.3 85 41.2
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.5e-10 68.9 75 42.7
Nitab4.5_0005741g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.3e-10 68.6 82 42.7
Gohir.A13G017966 Gossypium hirsutum HOM05D001383 ORTHO05D000309 7.3e-10 67.4 86 39.5
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.3e-10 67.4 75 44.0
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.3e-10 67.4 75 44.0
Prupe.1G219400 Prunus persica HOM05D033489 ORTHO05D000309 1.2e-09 66.6 56 50.0
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 1.6e-09 66.2 82 39.0
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.6e-09 65.1 94 37.2
Gohir.A10G176350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.6e-09 65.1 86 37.2
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 3.6e-09 65.1 83 36.1
SGA_v2.0_scaffold79G25662 Striga asiatica HOM05D001383 ORTHO05D000309 3.6e-09 65.1 94 35.1
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 4.7e-09 64.7 86 37.2
Gohir.D08G061401 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.2e-09 64.3 92 37.0
Nitab4.5_0013592g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.2e-09 64.3 81 39.5
Gohir.A13G051550 Gossypium hirsutum HOM05D001383 ORTHO05D000309 8.0e-09 63.9 86 37.2
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.0e-09 63.9 83 38.6
Nitab4.5_0010359g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.0e-09 63.9 81 40.7
Gohir.A08G119166 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.1e-08 63.5 86 36.0
SGA_v2.0_scaffold13G06411 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-08 63.5 82 36.6
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-08 63.2 79 35.4
Nitab4.5_0005772g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-08 63.2 82 37.8
Oeu042598.1 Olea europaea HOM05D001383 ORTHO05D000309 1.4e-08 63.2 76 38.2
Peaxi162Scf00465g00011 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-08 63.2 86 37.2
Peaxi162Scf01316g00007 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-08 63.2 86 37.2
DCAR_023922 Daucus carota HOM05D001383 ORTHO05D000309 1.8e-08 62.8 83 36.1
Gohir.A05G239250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.8e-08 62.8 85 38.8
CiPaw.08G134400 Carya illinoinensis HOM05D015495 ORTHO05D024749 2.3e-08 62.4 48 54.2
Gohir.A13G041750 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.3e-08 62.4 86 36.0
CAN.G1288.6 Capsicum annuum HOM05D004040 ORTHO05D000309 3.1e-08 62.0 69 40.6
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 3.1e-08 62.0 76 38.2
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 3.1e-08 62.0 82 34.1
vmacro20400 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.1e-08 62.0 75 38.7
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.0e-08 61.6 74 37.8
Nitab4.5_0009037g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.0e-08 61.6 71 42.3
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 5.2e-08 61.2 84 35.7
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.2e-08 61.2 85 36.5
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.2e-08 61.2 85 36.5
Peaxi162Scf00043g00065 Petunia axillaris HOM05D004040 ORTHO05D000309 5.2e-08 61.2 70 38.6
Peaxi162Scf00274g00613 Petunia axillaris HOM05D004040 ORTHO05D000309 5.2e-08 61.2 70 38.6
Peaxi162Scf00677g00029 Petunia axillaris HOM05D004040 ORTHO05D000309 5.2e-08 61.2 70 38.6
Solyc05g017863.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 5.2e-08 61.2 72 38.9
Gohir.A01G145614 Gossypium hirsutum HOM05D001383 ORTHO05D000309 6.8e-08 60.8 77 40.3
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.8e-08 60.8 81 37.0
vmacro00770 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 6.8e-08 60.8 84 35.7
Peaxi162Scf00215g00316 Petunia axillaris HOM05D004040 ORTHO05D000309 8.9e-08 60.5 82 35.4
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 8.9e-08 60.5 73 39.7
Nitab4.5_0013705g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-07 60.1 85 40.0
Nitab4.5_0022073g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.2e-07 60.1 69 42.0
Oeu031331.1 Olea europaea HOM05D001383 ORTHO05D000309 1.2e-07 60.1 76 35.5
Peaxi162Scf00050g02421 Petunia axillaris HOM05D004040 ORTHO05D000309 1.2e-07 60.1 77 36.4
Peaxi162Scf00099g01610 Petunia axillaris HOM05D004040 ORTHO05D000309 1.2e-07 60.1 77 36.4
Peaxi162Scf00100g00020 Petunia axillaris HOM05D004040 ORTHO05D000309 1.2e-07 60.1 77 36.4
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 1.2e-07 60.1 70 35.7
Gohir.A10G122250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.0e-07 59.3 74 39.2
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 2.0e-07 59.3 68 45.6
Gohir.A09G200200 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.6e-07 58.9 79 39.2
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.6e-07 58.9 72 38.9
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 2.6e-07 58.9 55 49.1
Peaxi162Scf00052g00714 Petunia axillaris HOM05D004040 ORTHO05D000309 2.6e-07 58.9 82 32.9
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 2.6e-07 58.9 82 32.9
Peaxi162Scf00897g00038 Petunia axillaris HOM05D004040 ORTHO05D000309 2.6e-07 58.9 82 32.9
Rhsim08G0011500 Rhododendron simsii HOM05D001383 ORTHO05D000309 2.6e-07 58.9 87 37.9
Nitab4.5_0000006g0600 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.4e-07 58.5 69 36.2
Peaxi162Scf00063g00023 Petunia axillaris HOM05D001383 ORTHO05D000309 3.4e-07 58.5 86 36.0
Peaxi162Scf01138g00111 Petunia axillaris HOM05D004040 ORTHO05D000309 3.4e-07 58.5 60 46.7
SGA_v2.0_scaffold1G00312 Striga asiatica HOM05D001383 ORTHO05D000309 3.4e-07 58.5 75 34.7
Nitab4.5_0029284g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.4e-07 58.2 81 38.3
Peaxi162Scf00070g00024 Petunia axillaris HOM05D004040 ORTHO05D000309 4.4e-07 58.2 77 35.1
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 4.4e-07 58.2 93 35.5
Peaxi162Scf00594g00013 Petunia axillaris HOM05D004040 ORTHO05D000309 4.4e-07 58.2 77 35.1
Peaxi162Scf01303g00011 Petunia axillaris HOM05D004040 ORTHO05D000309 4.4e-07 58.2 77 35.1
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 4.4e-07 58.2 75 34.7
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 4.4e-07 58.2 75 34.7
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 4.4e-07 58.2 75 34.7
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 4.4e-07 58.2 75 34.7
Gohir.A01G116801 Gossypium hirsutum HOM05D001383 ORTHO05D000309 5.8e-07 57.8 80 35.0
Peaxi162Scf01215g00003 Petunia axillaris HOM05D004040 ORTHO05D000309 5.8e-07 57.8 82 32.9
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 5.8e-07 57.8 72 41.7
DCAR_000974 Daucus carota HOM05D001383 ORTHO05D000309 7.5e-07 57.4 78 35.9
Nitab4.5_0003332g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.5e-07 57.4 76 39.5
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.5e-07 57.4 78 41.0
Peaxi162Scf00039g00218 Petunia axillaris HOM05D022774 ORTHO05D000309 7.5e-07 57.4 63 41.3
Prupe.1G276400 Prunus persica HOM05D033489 ORTHO05D000309 7.5e-07 57.4 45 60.0
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 7.5e-07 57.4 68 41.2
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 9.8e-07 57.0 95 31.6
Gohir.D11G247150 Gossypium hirsutum HOM05D001383 ORTHO05D000309 9.8e-07 57.0 72 38.9
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-06 56.6 95 31.6
Gohir.A12G210350 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.3e-06 56.6 80 37.5
Gohir.D10G135250 Gossypium hirsutum HOM05D001383 ORTHO05D000309 1.3e-06 56.6 65 41.5
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-06 56.6 74 33.8
Hma1.2p1_2672F.1_g326690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.3e-06 56.6 83 36.1
Nitab4.5_0001650g0110 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.3e-06 56.6 83 34.9
Psat3g069680 Pisum sativum HOM05D018012 ORTHO05D000309 1.7e-06 56.2 80 35.0
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 2.2e-06 55.8 66 43.9
Nitab4.5_0008946g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-06 55.8 75 38.7
Lsat_1_v5_gn_3_4400 Lactuca sativa HOM05D001383 ORTHO05D000309 2.9e-06 55.5 83 33.7
Peaxi162Scf00090g00816 Petunia axillaris HOM05D004040 ORTHO05D000309 2.9e-06 55.5 82 31.7
SGA_v2.0_scaffold46G17446 Striga asiatica HOM05D001383 ORTHO05D000309 2.9e-06 55.5 101 31.7
Gohir.A01G201950 Gossypium hirsutum HOM05D001383 ORTHO05D000309 3.7e-06 55.1 80 36.2
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 3.7e-06 55.1 80 38.8
Nitab4.5_0006039g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.7e-06 55.1 56 46.4
DCAR_017338 Daucus carota HOM05D001383 ORTHO05D000309 4.9e-06 54.7 71 35.2
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.9e-06 54.7 73 43.8
Nitab4.5_0000082g0450 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.9e-06 54.7 83 31.3
Nitab4.5_0004970g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.9e-06 54.7 84 34.5
SGA_v2.0_scaffold12G06232 Striga asiatica HOM05D001383 ORTHO05D000309 4.9e-06 54.7 82 34.1
SGA_v2.0_scaffold23G10087 Striga asiatica HOM05D001383 ORTHO05D000309 4.9e-06 54.7 74 36.5
Nitab4.5_0003883g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.4e-06 54.3 56 46.4
Prupe.8G073400 Prunus persica HOM05D001383 ORTHO05D000309 6.4e-06 54.3 62 40.3
Solyc12g150117.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 6.4e-06 54.3 51 41.2
CANSAT80G2566 Cannabis sativa HOM05D001383 ORTHO05D000309 8.3e-06 53.9 66 40.9
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 8.3e-06 53.9 71 35.2
Gohir.A06G141133 Gossypium hirsutum HOM05D001383 ORTHO05D000309 8.3e-06 53.9 61 41.0


User provided reference genes

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