Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 1.1e-84 316.6 158 100.0
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 2.6e-75 285.4 159 90.6
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 5.0e-74 281.2 161 90.1
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 1.5e-70 269.6 158 83.5
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 2.2e-69 265.8 159 81.8
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 6.3e-69 264.2 153 85.0
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 4.1e-68 261.5 153 83.7
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 4.1e-68 261.5 152 82.2
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 9.1e-68 260.4 156 78.2
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.2e-67 260.0 153 83.0
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 2.6e-67 258.8 153 81.0
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 4.5e-67 258.1 152 80.9
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 7.7e-67 257.3 158 79.1
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 1.0e-66 256.9 153 79.7
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.0e-66 256.9 145 84.1
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 6.5e-66 254.2 156 78.2
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 8.5e-66 253.8 149 77.9
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 8.5e-66 253.8 155 78.1
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 8.5e-66 253.8 152 78.9
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 1.9e-65 252.7 156 73.1
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 3.2e-65 251.9 153 75.8
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 4.2e-65 251.5 151 77.5
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 4.2e-65 251.5 150 78.0
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 4.2e-65 251.5 153 77.8
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 5.5e-65 251.1 156 75.6
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 7.2e-65 250.8 148 78.4
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 9.4e-65 250.4 154 79.9
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.1e-64 249.2 153 76.5
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 2.1e-64 249.2 156 74.4
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 2.7e-64 248.8 156 75.0
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 3.6e-64 248.4 158 78.5
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 4.7e-64 248.1 153 75.8
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 4.7e-64 248.1 145 79.3
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 6.1e-64 247.7 158 74.7
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 7.9e-64 247.3 135 83.0
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 7.9e-64 247.3 137 82.5
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 7.9e-64 247.3 155 74.8
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 1.4e-63 246.5 156 75.0
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 1.4e-63 246.5 150 77.3
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 1.4e-63 246.5 139 80.6
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.4e-63 246.5 150 76.0
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 1.8e-63 246.1 153 75.8
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 1.8e-63 246.1 153 75.8
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 1.8e-63 246.1 158 75.3
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 1.8e-63 246.1 136 81.6
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 2.3e-63 245.7 155 77.4
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 2.3e-63 245.7 155 77.4
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 2.3e-63 245.7 155 77.4
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 2.3e-63 245.7 149 77.2
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 3.0e-63 245.4 151 76.2
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 3.0e-63 245.4 150 76.0
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 3.9e-63 245.0 156 73.1
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 5.1e-63 244.6 150 76.0
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 5.1e-63 244.6 148 76.4
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 5.1e-63 244.6 156 75.6
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 2.0e-62 242.7 138 81.2
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 2.0e-62 242.7 138 81.2
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 2.0e-62 242.7 138 81.2
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 2.0e-62 242.7 138 81.2
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 2.0e-62 242.7 138 81.2
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 2.0e-62 242.7 153 74.5
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.0e-62 242.7 152 73.7
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.0e-62 242.7 152 73.7
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 2.0e-62 242.7 155 76.8
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 2.0e-62 242.7 158 72.8
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 2.6e-62 242.3 153 73.9
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 2.6e-62 242.3 149 74.5
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 2.6e-62 242.3 152 74.3
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 3.3e-62 241.9 167 71.3
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 3.3e-62 241.9 157 73.2
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 4.4e-62 241.5 156 73.7
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 4.4e-62 241.5 154 74.7
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 5.7e-62 241.1 154 73.4
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 5.7e-62 241.1 154 73.4
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 5.7e-62 241.1 151 76.8
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 5.7e-62 241.1 135 80.7
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 5.7e-62 241.1 138 80.4
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.7e-62 241.1 200 64.5
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 9.7e-62 240.4 149 74.5
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 1.3e-61 240.0 154 74.0
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 2.2e-61 239.2 137 77.4
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 2.2e-61 239.2 149 74.5
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 2.8e-61 238.8 150 74.0
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 3.7e-61 238.4 150 73.3
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.7e-61 238.4 205 62.9
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 3.7e-61 238.4 155 72.9
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 4.8e-61 238.0 150 73.3
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 4.8e-61 238.0 150 73.3
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 6.3e-61 237.7 154 73.4
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 6.3e-61 237.7 136 80.9
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.2e-61 237.3 200 64.0
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 150 73.3
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.1e-60 236.9 155 74.8
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.4e-60 236.5 156 71.2
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.8e-60 236.1 150 72.0
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.8e-60 236.1 157 72.0
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 2.4e-60 235.7 131 80.9
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 2.4e-60 235.7 154 71.4
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 2.4e-60 235.7 154 72.7
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 4.1e-60 235.0 154 70.1
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 2.0e-59 232.6 137 78.8
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 4.5e-59 231.5 157 70.7
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 1.7e-58 229.6 149 71.8
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 1.5e-57 226.5 137 73.0
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 1.9e-57 226.1 152 71.1
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 1.2e-56 223.4 133 73.7
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 2.1e-56 222.6 153 69.3
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 8.0e-56 220.7 131 76.3
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 8.8e-55 217.2 173 62.4
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 5.3e-52 208.0 131 71.8
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 2.7e-51 205.7 131 74.8
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 2.7e-51 205.7 133 72.9
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 8.0e-48 194.1 158 64.6
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 1.4e-44 183.3 146 60.3
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 9.1e-44 180.6 99 83.8
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 5.9e-43 177.9 138 63.8
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 5.9e-43 177.9 139 56.1
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 5.9e-43 177.9 97 81.4
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.8e-31 139.8 83 73.5
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-23 112.5 83 63.9
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.2e-22 110.5 72 70.8
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 7.3e-17 91.3 155 35.5
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 1.4e-15 87.0 76 57.9
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 1.4e-12 77.0 132 34.1
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 5.2e-07 58.5 49 59.2


User provided reference genes

Program Settings