Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 1.4e-47 192.6 96 100.0
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 1.2e-33 146.4 94 75.5
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 5.6e-28 127.5 94 66.0
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 2.1e-27 125.6 77 84.4
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 8.0e-27 123.6 94 66.0
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 1.4e-26 122.9 89 67.4
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 1.8e-26 122.5 92 60.9
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 1.8e-26 122.5 92 60.9
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 1.5e-25 119.4 92 65.2
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 2.0e-25 119.0 89 65.2
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 3.4e-25 118.2 89 64.0
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 3.4e-25 118.2 89 64.0
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 3.4e-25 118.2 87 67.8
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 3.4e-25 118.2 89 66.3
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 3.4e-25 118.2 90 62.2
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 4.4e-25 117.9 89 64.0
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 4.4e-25 117.9 89 64.0
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 4.4e-25 117.9 94 62.8
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 7.5e-25 117.1 90 64.4
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 9.8e-25 116.7 89 62.9
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 9.8e-25 116.7 91 62.6
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 1.3e-24 116.3 89 62.9
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 1.3e-24 116.3 89 62.9
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 1.3e-24 116.3 89 62.9
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 1.3e-24 116.3 89 60.7
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 1.3e-24 116.3 94 60.6
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 1.7e-24 115.9 89 65.2
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 2.9e-24 115.2 87 67.8
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 3.7e-24 114.8 90 66.7
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 8.3e-24 113.6 91 60.4
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 8.3e-24 113.6 94 60.6
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 8.3e-24 113.6 87 66.7
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 8.3e-24 113.6 89 65.2
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 1.1e-23 113.2 92 60.9
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 1.4e-23 112.8 81 64.2
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 3.2e-23 111.7 89 60.7
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 7.1e-23 110.5 96 56.2
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 9.2e-23 110.2 89 59.6
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 9.2e-23 110.2 89 58.4
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 2.7e-22 108.6 89 57.3
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 2.7e-22 108.6 89 60.7
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 2.7e-22 108.6 94 57.4
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 2.7e-22 108.6 85 65.9
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 3.5e-22 108.2 89 58.4
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 3.5e-22 108.2 85 67.1
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 6.0e-22 107.5 77 72.7
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 6.0e-22 107.5 90 58.9
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 6.0e-22 107.5 94 60.6
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 1.0e-21 106.7 89 53.9
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 1.3e-21 106.3 93 53.8
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 1.7e-21 105.9 89 56.2
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 2.3e-21 105.5 73 72.6
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 2.3e-21 105.5 89 59.6
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 3.0e-21 105.1 91 60.4
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 3.0e-21 105.1 94 55.3
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 3.0e-21 105.1 94 55.3
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.9e-21 104.8 89 58.4
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.9e-21 104.8 89 58.4
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 5.1e-21 104.4 89 56.2
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 5.1e-21 104.4 89 57.3
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 1.1e-20 103.2 89 57.3
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 1.9e-20 102.4 89 59.6
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 3.3e-20 101.7 89 52.8
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 4.3e-20 101.3 90 57.8
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 7.3e-20 100.5 92 52.2
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 7.3e-20 100.5 89 57.3
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.6e-19 99.4 90 55.6
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 2.1e-19 99.0 89 52.8
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 3.6e-19 98.2 89 53.9
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.1e-18 96.7 90 54.4
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 4.0e-18 94.7 95 56.8
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 5.2e-18 94.4 92 55.4
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 1.2e-17 93.2 89 51.7
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 1.5e-17 92.8 92 45.7
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 2.0e-17 92.4 81 59.3
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.0e-17 92.4 77 58.4
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 5.8e-17 90.9 89 47.2
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 1.3e-16 89.7 66 66.7
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.3e-16 89.7 66 66.7
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 2.2e-16 89.0 96 55.2
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 2.2e-16 89.0 91 50.5
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 3.7e-16 88.2 90 51.1
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 3.7e-16 88.2 91 50.5
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 1.3e-13 79.7 84 46.4
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.7e-13 79.3 65 60.0
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 2.3e-13 79.0 91 46.2
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 8.9e-10 67.0 52 61.5
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 2.4e-07 58.9 89 40.4
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 2.1e-06 55.8 64 43.8
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 4.6e-06 54.7 46 52.2


User provided reference genes

Program Settings