Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.9e-71 272.3 128 100.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 7.6e-57 223.8 105 100.0
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 7.9e-46 187.2 105 83.8
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 4.5e-41 171.4 105 73.3
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 4.5e-41 171.4 105 76.2
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 1.0e-40 170.2 105 76.2
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 3.8e-40 168.3 104 71.2
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 1.4e-39 166.4 103 72.8
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.9e-39 166.0 103 73.8
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.2e-39 165.2 105 72.4
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 7.2e-39 164.1 97 75.3
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 9.4e-39 163.7 97 74.2
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 7.9e-38 160.6 107 68.2
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.0e-37 160.2 103 70.9
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 3.0e-37 158.7 105 67.6
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 6.7e-37 157.5 126 59.5
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.7e-36 154.5 107 61.7
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.7e-36 154.5 107 61.7
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 1.7e-35 152.9 100 67.0
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.8e-35 152.1 99 68.7
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 2.8e-35 152.1 105 63.8
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 1.1e-34 150.2 103 67.0
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.1e-34 150.2 97 70.1
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.4e-34 149.8 76 81.6
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.8e-34 149.4 103 64.1
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 2.4e-34 149.1 89 71.9
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 3.1e-34 148.7 105 63.8
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 4.1e-34 148.3 105 64.8
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 4.1e-34 148.3 105 64.8
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 5.3e-34 147.9 103 64.1
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 5.3e-34 147.9 75 81.3
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 6.9e-34 147.5 103 65.0
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.2e-33 146.7 99 67.7
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.2e-33 146.7 103 66.0
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.0e-33 146.0 93 69.9
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 2.6e-33 145.6 88 71.6
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 4.5e-33 144.8 103 61.2
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 7.7e-33 144.1 93 68.8
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 1.3e-32 143.3 103 63.1
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.3e-32 143.3 101 62.4
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 1.7e-32 142.9 104 64.4
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 2.9e-32 142.1 103 63.1
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 3.8e-32 141.7 104 61.5
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 3.8e-32 141.7 104 62.5
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 5.0e-32 141.4 97 63.9
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 6.5e-32 141.0 109 58.7
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 8.5e-32 140.6 103 62.1
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 8.5e-32 140.6 103 60.2
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.1e-31 140.2 103 62.1
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.1e-31 140.2 103 62.1
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.1e-31 140.2 152 48.0
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 1.4e-31 139.8 94 66.0
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.4e-31 139.8 112 60.7
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 1.9e-31 139.4 98 65.3
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 2.5e-31 139.0 107 59.8
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 5.5e-31 137.9 104 60.6
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 5.5e-31 137.9 102 64.7
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 7.2e-31 137.5 103 59.2
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 7.2e-31 137.5 100 62.0
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 7.2e-31 137.5 103 60.2
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 1.2e-30 136.7 105 57.1
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 1.2e-30 136.7 96 66.7
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 1.2e-30 136.7 96 66.7
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.6e-30 136.3 107 60.7
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.6e-30 136.3 80 70.0
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 2.1e-30 136.0 107 60.7
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 3.6e-30 135.2 105 61.9
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 4.7e-30 134.8 103 59.2
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 6.1e-30 134.4 103 58.3
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 7.9e-30 134.0 96 63.5
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 1.0e-29 133.7 106 59.4
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.0e-29 133.7 105 58.1
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.0e-29 133.7 106 58.5
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 2.3e-29 132.5 103 63.1
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 2.3e-29 132.5 103 62.1
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.9e-29 131.7 76 73.7
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 6.7e-29 131.0 93 60.2
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 6.7e-29 131.0 96 61.5
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.1e-28 130.2 106 57.5
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 2.0e-28 129.4 102 61.8
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 3.3e-28 128.6 114 55.3
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.3e-27 126.7 89 60.7
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 4.8e-27 124.8 82 64.6
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 6.3e-27 124.4 107 53.3
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 7.0e-26 120.9 73 67.1
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.5e-25 119.8 84 58.3
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 5.9e-25 117.9 82 62.2
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.3e-24 116.7 91 57.1
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 3.0e-21 105.5 66 62.1
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 2.0e-20 102.8 92 52.2
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 8.2e-19 97.4 58 63.8
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 3.5e-17 92.0 63 55.6
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 4.5e-17 91.7 54 68.5
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 7.7e-17 90.9 51 66.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.7e-16 89.7 69 49.3
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 1.5e-15 86.7 51 64.7
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 5.2e-13 78.2 55 54.5
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 9.1e-10 67.4 59 52.5
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 2.0e-09 66.2 48 60.4
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.8e-08 62.0 66 40.9
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 7.2e-07 57.8 37 62.2
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 7.2e-07 57.8 74 33.8


User provided reference genes

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