Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 2.7e-80 302.4 203 100.0
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 1.9e-70 269.6 203 91.1
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 3.4e-59 232.3 204 85.8
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 2.2e-50 203.0 206 79.6
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.2e-50 203.0 206 79.6
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 4.9e-50 201.8 206 79.1
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.9e-47 192.2 204 77.5
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 3.3e-46 189.1 204 61.8
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.8e-44 183.3 203 76.8
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.8e-44 183.3 203 59.1
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 1.1e-41 174.1 203 55.7
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 4.6e-40 168.7 207 53.1
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 6.0e-40 168.3 197 72.1
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.8e-39 166.8 205 64.4
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 1.8e-39 166.8 193 54.9
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 3.9e-39 165.6 201 59.2
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 5.1e-39 165.2 197 71.1
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 1.9e-38 163.3 203 57.6
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 1.9e-38 163.3 212 51.4
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 3.3e-38 162.5 211 50.2
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 4.3e-38 162.2 211 50.2
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 4.3e-38 162.2 213 50.7
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 2.1e-37 159.8 205 51.2
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.4e-36 157.1 205 49.8
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 9.0e-36 154.5 206 59.2
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 2.6e-35 152.9 198 55.6
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 2.6e-35 152.9 205 66.3
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 9.3e-33 144.4 207 44.4
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 1.2e-32 144.1 198 49.0
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 1.2e-32 144.1 204 45.6
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.6e-32 143.7 206 46.1
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.1e-32 143.3 203 49.8
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 7.9e-32 141.4 206 47.1
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 1.0e-31 141.0 203 59.1
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.0e-31 141.0 214 47.2
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 2.3e-31 139.8 206 50.5
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 3.0e-31 139.4 209 54.1
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 3.0e-31 139.4 208 53.8
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 8.7e-31 137.9 214 51.4
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 1.1e-30 137.5 209 50.7
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 1.5e-30 137.1 208 48.6
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.9e-30 136.7 206 42.2
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 5.7e-30 135.2 209 48.3
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 1.3e-29 134.0 203 54.2
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 4.8e-29 132.1 198 55.1
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 4.1e-28 129.0 185 45.9
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 4.1e-28 129.0 204 48.0
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 2.0e-27 126.7 205 47.3
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 3.4e-27 125.9 206 44.7
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.4e-25 120.6 205 46.3
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 2.5e-25 119.8 200 56.5
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 3.2e-25 119.4 205 44.9
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 3.2e-25 119.4 205 44.9
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 4.2e-25 119.0 193 47.2
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 1.6e-24 117.1 208 46.6
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 4.6e-24 115.5 208 40.4
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 4.6e-24 115.5 205 42.4
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 4.6e-24 115.5 204 36.8
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 6.1e-24 115.2 204 37.3
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 6.1e-24 115.2 148 61.5
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 7.9e-24 114.8 210 46.2
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 2.3e-23 113.2 205 39.0
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 3.0e-23 112.8 203 47.3
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 3.9e-23 112.5 152 53.3
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 3.9e-23 112.5 207 51.2
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 6.7e-23 111.7 161 68.9
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 1.5e-22 110.5 170 62.9
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 1.5e-22 110.5 207 58.9
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 1.9e-22 110.2 72 69.4
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 9.7e-22 107.8 189 57.7
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 1.6e-21 107.1 209 41.6
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 4.8e-21 105.5 207 47.3
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 6.3e-21 105.1 208 44.2
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 8.2e-21 104.8 183 38.8
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 1.8e-20 103.6 151 47.7
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.2e-19 100.9 161 46.6
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.0e-19 100.1 195 45.1
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 2.0e-19 100.1 211 43.6
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 2.6e-19 99.8 195 48.2
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 5.9e-19 98.6 204 41.7
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 5.9e-19 98.6 204 41.7
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.5e-17 93.2 204 51.0
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.5e-17 93.2 74 60.8
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 9.4e-17 91.3 205 39.0
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 9.4e-17 91.3 203 37.4
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 3.6e-16 89.4 149 49.7
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 7.9e-16 88.2 155 51.0
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 1.0e-15 87.8 61 67.2
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.0e-15 87.8 76 60.5
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 1.4e-15 87.4 63 69.8
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.8e-15 87.0 71 62.0
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 2.3e-15 86.7 205 39.5
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 2.3e-15 86.7 63 68.3
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 6.7e-15 85.1 143 54.5
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.5e-14 84.0 200 33.0
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 2.0e-14 83.6 66 60.6
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 3.3e-14 82.8 64 62.5
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.3e-13 80.9 178 57.3
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 1.7e-13 80.5 74 54.1
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 2.2e-13 80.1 203 35.5
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 8.2e-13 78.2 50 76.0
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 7.7e-11 71.6 47 66.0
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.7e-10 70.5 210 32.9
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 2.7e-08 63.2 30 83.3
Sed0010921 Sechium edule HOM05D007152 ORTHO05D008912 5.1e-07 58.9 195 30.8
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 2.6e-06 56.6 161 36.6


User provided reference genes

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