Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G125500 Prunus persica HOM05D039578 ORTHO05D035700 2.0e-43 178.7 91 100.0
RcHm_v2.0_Chr4g0424301 Rosa chinensis HOM05D039578 ORTHO05D035700 3.1e-20 101.7 88 63.6
FvH4_4g19290 Fragaria vesca HOM05D039578 ORTHO05D035700 2.9e-18 95.1 88 60.2
Manes.03G201501 Manihot esculenta HOM05D000786 ORTHO05D000779 3.6e-08 61.6 63 49.2
Duzib212G0738 Durio zibethinus HOM05D015449 ORTHO05D017881 6.1e-08 60.8 52 59.6
Manes.05G001600 Manihot esculenta HOM05D000786 ORTHO05D000779 7.9e-08 60.5 50 56.0
COL.COLO4_34670 Corchorus olitorius HOM05D015449 ORTHO05D017881 3.9e-07 58.2 56 58.9
Thecc.04G295200 Theobroma cacao HOM05D015449 ORTHO05D017881 3.9e-07 58.2 81 45.7
CAN.G668.24 Capsicum annuum HOM05D000786 ORTHO05D000779 1.1e-06 56.6 60 40.0
MELO3C021286.2 Cucumis melo HOM05D000786 ORTHO05D000779 1.1e-06 56.6 50 54.0
Hma1.2p1_0544F.1_g175620 Hydrangea macrophylla HOM05D000786 ORTHO05D000779 1.1e-06 56.6 91 36.3
PGSC0003DMG400031801 Solanum tuberosum HOM05D000786 ORTHO05D000779 1.1e-06 56.6 60 40.0
Nitab4.5_0000116g0100 Nicotiana tabacum HOM05D000786 ORTHO05D000779 1.5e-06 56.2 61 42.6
Nitab4.5_0004002g0020 Nicotiana tabacum HOM05D000786 ORTHO05D000779 1.5e-06 56.2 61 41.0
Oeu013988.1 Olea europaea HOM05D000786 ORTHO05D000779 1.5e-06 56.2 62 45.2
Sopen09g030450 Solanum pennellii HOM05D000786 ORTHO05D000779 1.5e-06 56.2 60 40.0
Cfa005844 Carpinus fangiana HOM05D000786 ORTHO05D000779 2.0e-06 55.8 53 49.1
DCAR_003138 Daucus carota HOM05D000786 ORTHO05D000779 2.0e-06 55.8 92 35.9
Thecc.09G085500 Theobroma cacao HOM05D000786 ORTHO05D000779 2.0e-06 55.8 89 37.1
Lsat_1_v5_gn_5_143041 Lactuca sativa HOM05D000786 ORTHO05D000779 2.6e-06 55.5 82 39.0
Nn3g21623 Nelumbo nucifera HOM05D000786 ORTHO05D000779 2.6e-06 55.5 60 50.0
Potri.010G140800 Populus trichocarpa HOM05D000786 ORTHO05D000779 2.6e-06 55.5 57 52.6
SMO172G0046 Selaginella moellendorffii HOM05D000786 ORTHO05D000779 2.6e-06 55.5 86 36.0
vmacro02416 Vaccinium macrocarpon HOM05D000786 ORTHO05D000779 3.3e-06 55.1 46 47.8
vmacro03014 Vaccinium macrocarpon HOM05D000786 ORTHO05D000779 4.4e-06 54.7 47 44.7
AL4G47040 Arabidopsis lyrata HOM05D000786 ORTHO05D000779 5.7e-06 54.3 51 49.0
Peaxi162Scf00001g00286 Petunia axillaris HOM05D000786 ORTHO05D000779 5.7e-06 54.3 54 42.6
AT2G47480 Arabidopsis thaliana HOM05D000786 ORTHO05D000779 7.4e-06 53.9 56 46.4
BcaB02g08768 Brassica carinata HOM05D000786 ORTHO05D000779 7.4e-06 53.9 57 43.9
Rhsim13G0006500 Rhododendron simsii HOM05D000786 ORTHO05D000779 7.4e-06 53.9 45 48.9
SEGI_03186 Sequoiadendron giganteum HOM05D000786 ORTHO05D000779 7.4e-06 53.9 76 39.5
Solyc09g075650.3 Solanum lycopersicum HOM05D000786 ORTHO05D000779 7.4e-06 53.9 60 38.3
Cpa.g.sc9.97 Carica papaya HOM05D000786 ORTHO05D000779 9.7e-06 53.5 71 40.8
Haze_05005 Corylus avellana HOM05D000786 ORTHO05D000779 9.7e-06 53.5 53 49.1


User provided reference genes

Program Settings