Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G123900 Prunus persica HOM05D005204 ORTHO05D006037 0.0e+00 1379.0 695 100.0
MD16G1164600 Malus domestica HOM05D005204 ORTHO05D006037 0.0e+00 1105.1 693 82.4
MD13G1164900 Malus domestica HOM05D005204 ORTHO05D006037 1.6e-302 1042.3 696 79.6
RcHm_v2.0_Chr4g0423341 Rosa chinensis HOM05D005204 ORTHO05D006037 6.4e-283 977.2 698 72.9
FvH4_4g18640 Fragaria vesca HOM05D005204 ORTHO05D006037 3.2e-274 948.3 698 71.2
FAN12G0364 Fragaria x ananassa HOM05D005204 ORTHO05D006037 1.7e-272 942.6 698 71.1
FAN17G1530 Fragaria x ananassa HOM05D005204 ORTHO05D006037 4.3e-271 937.9 698 70.9
FAN12G3005 Fragaria x ananassa HOM05D005204 ORTHO05D006037 6.2e-270 934.1 684 71.6
FAN07G2681 Fragaria x ananassa HOM05D005204 ORTHO05D006037 3.8e-267 924.9 698 70.3
QL06p010355 Quercus lobata HOM05D005204 ORTHO05D006037 3.5e-265 918.3 694 68.2
Cfa015426 Carpinus fangiana HOM05D005204 ORTHO05D006037 1.2e-260 903.3 716 64.4
CiPaw.02G079900 Carya illinoinensis HOM05D005204 ORTHO05D006037 2.5e-242 842.4 698 63.3
Thecc.04G288800 Theobroma cacao HOM05D005204 ORTHO05D006037 4.2e-242 841.6 678 66.1
Haze_01167 Corylus avellana HOM05D005204 ORTHO05D006037 1.5e-239 833.2 864 53.6
COL.COLO4_13824 Corchorus olitorius HOM05D005204 ORTHO05D006037 4.8e-238 828.2 699 62.4
Ciclev10004466m.g Citrus clementina HOM05D005204 ORTHO05D006037 1.1e-229 800.4 674 61.9
TWI73G0558 Tripterygium wilfordii HOM05D005204 ORTHO05D006037 3.8e-227 792.0 698 63.2
Atru.chr4.2898 Acer truncatum HOM05D005204 ORTHO05D006037 1.5e-223 780.0 671 62.4
Gohir.A02G050800 Gossypium hirsutum HOM05D005204 ORTHO05D006037 8.2e-222 774.2 701 61.1
TAR633G1027 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.4e-221 773.5 672 61.5
Duzib052G0651 Durio zibethinus HOM05D005204 ORTHO05D006037 2.4e-221 772.7 674 61.9
Manes.03G200100 Manihot esculenta HOM05D005204 ORTHO05D006037 5.9e-220 768.1 678 61.5
Gohir.D02G055700 Gossypium hirsutum HOM05D005204 ORTHO05D006037 1.4e-216 756.9 681 62.0
CSS0048761 Camellia sinensis var. sinensis HOM05D005204 ORTHO05D006037 4.4e-215 751.9 700 59.0
Gorai.005G061700 Gossypium raimondii HOM05D005204 ORTHO05D006037 4.1e-213 745.3 681 61.2
Potri.008G219100 Populus trichocarpa HOM05D005204 ORTHO05D006037 8.0e-209 731.1 695 56.7
VMungo1309G0885 Vigna mungo HOM05D005204 ORTHO05D006037 1.5e-207 726.9 714 58.5
Potri.010G010480 Populus trichocarpa HOM05D005204 ORTHO05D006037 3.4e-207 725.7 677 57.5
Rhsim02G0007000 Rhododendron simsii HOM05D005204 ORTHO05D006037 4.4e-207 725.3 683 58.1
Actinidia14280 Actinidia chinensis HOM05D005204 ORTHO05D006037 3.7e-206 722.2 648 59.7
Nn1g01973 Nelumbo nucifera HOM05D005204 ORTHO05D006037 1.4e-205 720.3 697 57.4
Sabra08G0151500 Salix brachista HOM05D005204 ORTHO05D006037 2.7e-204 716.1 677 56.6
Cpa.g.sc50.164 Carica papaya HOM05D005204 ORTHO05D006037 7.7e-204 714.5 678 57.2
Hma1.2p1_0078F.1_g040360 Hydrangea macrophylla HOM05D005204 ORTHO05D006037 1.3e-203 713.8 681 58.1
arahy.Tifrunner.gnm1.ann1.02VXE5 Arachis hypogaea HOM05D005204 ORTHO05D006037 8.5e-203 711.1 693 58.3
Psat1g155920 Pisum sativum HOM05D005204 ORTHO05D006037 1.5e-202 710.3 704 57.8
Glyma.09G042300 Glycine max HOM05D005204 ORTHO05D006037 1.6e-201 706.8 700 58.6
Glyma.15G150700 Glycine max HOM05D005204 ORTHO05D006037 2.1e-201 706.4 700 58.7
Lj6g0026338 Lotus japonicus HOM05D005204 ORTHO05D006037 8.0e-201 704.5 701 57.9
arahy.Tifrunner.gnm1.ann1.J2HRGN Arachis hypogaea HOM05D005204 ORTHO05D006037 1.4e-200 703.7 693 58.0
Lalb_Chr20g0117381 Lupinus albus HOM05D005204 ORTHO05D006037 9.8e-199 697.6 696 56.6
Ca_01912_v3 Cicer arietinum L. HOM05D005204 ORTHO05D006037 3.7e-198 695.7 706 58.4
Phvul.009G250500 Phaseolus vulgaris HOM05D005204 ORTHO05D006037 1.6e-196 690.3 734 55.0
MBI18_g25094_MAGBIO Magnolia biondii HOM05D005204 ORTHO05D006037 2.5e-194 682.9 685 57.1
Sabra10G0006400 Salix brachista HOM05D005204 ORTHO05D006037 1.2e-191 674.1 697 54.2
vmacro15212 Vaccinium macrocarpon HOM05D005204 ORTHO05D006037 3.7e-190 669.1 700 55.0
TPR.G28067 Trifolium pratense HOM05D005204 ORTHO05D006037 9.2e-189 664.5 611 60.1
Eucgr.H03961 Eucalyptus grandis HOM05D005204 ORTHO05D006037 4.6e-188 662.1 702 53.7
PGR004G0276 Punica granatum HOM05D005204 ORTHO05D006037 4.6e-188 662.1 696 54.6
Lalb_Chr18g0054391 Lupinus albus HOM05D005204 ORTHO05D006037 7.8e-188 661.4 695 55.7
Medtr2g436080 Medicago truncatula HOM05D005204 ORTHO05D006037 7.8e-188 661.4 607 61.4
CAN.G484.49 Capsicum annuum HOM05D005204 ORTHO05D006037 2.8e-185 652.9 707 53.2
GSVIVG01035108001 Vitis vinifera HOM05D005204 ORTHO05D006037 4.0e-184 649.0 745 52.9
Oeu016254.2 Olea europaea HOM05D005204 ORTHO05D006037 6.8e-184 648.3 722 51.5
Peaxi162Scf00646g00324 Petunia axillaris HOM05D005204 ORTHO05D006037 1.2e-183 647.5 683 53.7
PGSC0003DMG400004628 Solanum tuberosum HOM05D005204 ORTHO05D006037 2.6e-183 646.4 713 52.9
Dinv29726 Davidia involucrata HOM05D005204 ORTHO05D006037 7.0e-181 638.3 591 58.0
Sopen12g034090 Solanum pennellii HOM05D005204 ORTHO05D006037 2.0e-180 636.7 701 52.9
Manes.03G198500 Manihot esculenta HOM05D005204 ORTHO05D006037 3.5e-180 636.0 655 55.9
Solyc12g099420.2 Solanum lycopersicum HOM05D005204 ORTHO05D006037 2.3e-179 633.3 702 52.7
AT3G16730 Arabidopsis thaliana HOM05D005204 ORTHO05D006037 3.0e-179 632.9 674 54.2
Sed0015514 Sechium edule HOM05D005204 ORTHO05D006037 1.2e-177 627.5 683 54.2
Aqoxy5G00784 Aquilegia oxysepala HOM05D005204 ORTHO05D006037 2.1e-177 626.7 639 55.6
BcaC05g28856 Brassica carinata HOM05D005204 ORTHO05D006037 4.7e-177 625.5 670 54.3
BraA05t22110Z Brassica rapa HOM05D005204 ORTHO05D006037 5.2e-176 622.1 670 54.3
BcaB06g25769 Brassica carinata HOM05D005204 ORTHO05D006037 6.8e-176 621.7 670 54.0
Oeu031982.1 Olea europaea HOM05D005204 ORTHO05D006037 1.5e-175 620.5 719 50.8
A05p32870 Brassica napus HOM05D005204 ORTHO05D006037 2.6e-175 619.8 670 54.2
AL3G29660 Arabidopsis lyrata HOM05D005204 ORTHO05D006037 5.8e-175 618.6 676 53.8
C05p49580 Brassica napus HOM05D005204 ORTHO05D006037 5.8e-175 618.6 670 53.7
Carub.0003s1646 Capsella rubella HOM05D005204 ORTHO05D006037 9.8e-175 617.8 675 53.6
BolC5t33716H Brassica oleracea HOM05D005204 ORTHO05D006037 3.7e-174 615.9 670 53.6
Sp3g15000 Schrenkiella parvula HOM05D005204 ORTHO05D006037 8.3e-174 614.8 675 53.2
ECA246G1739 Erigeron canadensis HOM05D005204 ORTHO05D006037 1.1e-173 614.4 684 51.9
THA.LOC104820287 Tarenaya hassleriana HOM05D005204 ORTHO05D006037 2.4e-173 613.2 681 52.6
EL10Ac3g06651 Beta vulgaris HOM05D005204 ORTHO05D006037 5.4e-173 612.1 696 51.1
Peaxi162Scf00065g01219 Petunia axillaris HOM05D005204 ORTHO05D006037 1.6e-172 610.5 680 52.1
MSTRG.24802 Avicennia marina HOM05D005204 ORTHO05D006037 5.1e-171 605.5 676 52.7
Cc03_g01540 Coffea canephora HOM05D005204 ORTHO05D006037 1.1e-170 604.4 725 50.8
Lj6A680G91 Lonicera japonica HOM05D005204 ORTHO05D006037 1.5e-170 604.0 606 55.8
Sc13g0003240 Simmondsia chinensis HOM05D005204 ORTHO05D006037 1.5e-170 604.0 678 52.7
SalBow5G0318 Salvia bowleyana HOM05D005204 ORTHO05D006037 3.3e-170 602.8 679 51.5
Thhalv10020220m.g Eutrema salsugineum HOM05D005204 ORTHO05D006037 3.6e-169 599.4 671 53.2
Aa31LG8G3820 Aethionema arabicum HOM05D005204 ORTHO05D006037 5.8e-167 592.0 688 52.2
BraA01t03817Z Brassica rapa HOM05D005204 ORTHO05D006037 7.6e-167 591.7 675 54.5
A01p37560 Brassica napus HOM05D005204 ORTHO05D006037 8.4e-166 588.2 675 54.1
HanXRQChr06g0173751 Helianthus annuus HOM05D005204 ORTHO05D006037 1.4e-165 587.4 692 50.7
Nitab4.5_0003767g0030 Nicotiana tabacum HOM05D005204 ORTHO05D006037 1.9e-165 587.0 705 50.1
BolC1t04731H Brassica oleracea HOM05D005204 ORTHO05D006037 7.1e-165 585.1 675 53.8
Nitab4.5_0003484g0040 Nicotiana tabacum HOM05D005204 ORTHO05D006037 7.8e-164 581.6 685 51.5
MELO3C010685.2 Cucumis melo HOM05D005204 ORTHO05D006037 3.9e-163 579.3 613 54.0
Migut.N00079 Erythranthe guttata HOM05D005204 ORTHO05D006037 1.9e-162 577.0 677 49.9
C01p47610 Brassica napus HOM05D005204 ORTHO05D006037 3.6e-161 572.8 676 53.4
Hund20528 Selenicereus undatus HOM05D005204 ORTHO05D006037 4.7e-161 572.4 673 51.3
Nitab4.5_0000570g0320 Nicotiana tabacum HOM05D005204 ORTHO05D006037 3.4e-159 566.2 700 49.1
Nitab4.5_0000695g0090 Nicotiana tabacum HOM05D005204 ORTHO05D006037 4.4e-159 565.8 689 49.3
BcaC09g48627 Brassica carinata HOM05D005204 ORTHO05D006037 3.2e-157 559.7 678 52.8
PSO210G5425 Papaver somniferum HOM05D005204 ORTHO05D006037 4.2e-157 559.3 691 49.1
PSO832G0069 Papaver somniferum HOM05D005204 ORTHO05D006037 2.3e-155 553.5 696 48.9
ClCG08G017750 Citrullus lanatus HOM05D005204 ORTHO05D006037 3.9e-155 552.7 608 52.6
Lsat_1_v5_gn_3_21680 Lactuca sativa HOM05D005204 ORTHO05D006037 8.7e-155 551.6 683 49.2
SGA_v2.0_scaffold428G51532 Striga asiatica HOM05D005204 ORTHO05D006037 3.3e-154 549.7 693 48.9
AUR62018070 Chenopodium quinoa HOM05D005204 ORTHO05D006037 1.9e-149 533.9 717 46.6
ATR0693G386 Amborella trichopoda HOM05D005204 ORTHO05D006037 4.2e-149 532.7 684 47.8
CsaV3_7G000690 Cucumis sativus L. HOM05D005204 ORTHO05D006037 7.1e-149 531.9 678 47.9
AUR62015273 Chenopodium quinoa HOM05D005204 ORTHO05D006037 2.3e-147 526.9 667 48.1
CsaV3_2G024870 Cucumis sativus L. HOM05D005204 ORTHO05D006037 7.6e-143 511.9 601 50.4
HPP92_012404 Vanilla planifolia HOM05D005204 ORTHO05D006037 3.9e-139 499.6 685 47.0
Ah.04g153660 Amaranthus hybridus HOM05D005204 ORTHO05D006037 5.1e-139 499.2 680 46.3
Zm00001eb322750 Zea mays HOM05D005204 ORTHO05D006037 1.2e-135 488.0 687 46.1
SHI00244 Sapria himalayana HOM05D005204 ORTHO05D006037 1.3e-134 484.6 787 42.8
DCAR_030505 Daucus carota HOM05D005204 ORTHO05D006037 6.0e-132 475.7 633 45.2
DCAR_023300 Daucus carota HOM05D005204 ORTHO05D006037 1.7e-126 457.6 604 46.7
Os07g0517300 Oryza sativa ssp. japonica HOM05D005204 ORTHO05D006037 1.1e-122 444.9 678 44.1
CDE05G2961 Ceratophyllum demersum HOM05D005204 ORTHO05D006037 5.7e-122 442.6 680 42.2
TAR362G0889 Trochodendron aralioides HOM05D005204 ORTHO05D006037 2.2e-121 440.7 492 51.4
CARHR091990 Cardamine hirsuta HOM05D005204 ORTHO05D006037 2.8e-113 413.7 430 55.6
Nn3g19294 Nelumbo nucifera HOM05D005204 ORTHO05D006037 2.6e-111 407.1 609 42.4
SEGI_08509 Sequoiadendron giganteum HOM05D005204 ORTHO05D006037 1.8e-99 367.9 726 36.6
Zm00001eb106060 Zea mays HOM05D005204 ORTHO05D006037 2.4e-96 357.5 605 40.0
Mapoly0137s0008 Marchantia polymorpha HOM05D005204 ORTHO05D006037 2.3e-78 297.7 620 36.0
SMO367G0335 Selaginella moellendorffii HOM05D005204 ORTHO05D006037 1.0e-75 288.9 697 34.1
Dinv44351 Davidia involucrata HOM05D005204 ORTHO05D006037 9.2e-72 275.8 672 33.3
TAR624G0487 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.9e-69 268.1 320 48.8
unitig_749.g14080 Utricularia gibba HOM05D005204 ORTHO05D006037 7.3e-61 239.6 660 30.8
CARHR091980 Cardamine hirsuta HOM05D005204 ORTHO05D006037 3.0e-54 217.6 245 52.2
ATR0693G078 Amborella trichopoda HOM05D005204 ORTHO05D006037 2.6e-50 204.5 231 52.4
TAR624G0737 Trochodendron aralioides HOM05D005204 ORTHO05D006037 5.4e-48 196.8 163 64.4
Actinidia13388 Actinidia chinensis HOM05D005204 ORTHO05D006037 1.1e-45 189.1 170 61.2
AagrBONN_evm.TU.Sc2ySwM_340.303 Anthoceros agrestis HOM05D005204 ORTHO05D006037 2.4e-40 171.4 385 34.8
CBR_g38039 Chara braunii HOM05D005204 ORTHO05D006037 4.6e-39 167.2 769 27.8
PGR004G0772 Punica granatum HOM05D005204 ORTHO05D006037 1.6e-31 142.1 137 59.1
PRCOL_00000998 Prasinoderma coloniale HOM05D005204 ORTHO05D006037 1.6e-28 132.1 642 26.6
Dinv29725 Davidia involucrata HOM05D005204 ORTHO05D006037 4.8e-28 130.6 100 68.0
DCAR_031703 Daucus carota HOM05D005204 ORTHO05D006037 1.7e-25 122.1 105 58.1
Manes.17G118669 Manihot esculenta HOM05D005204 ORTHO05D006037 3.8e-25 120.9 138 54.3
TAR362G0435 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.3e-14 85.9 110 50.0
Cre09.g408900 Chlamydomonas reinhardtii HOM05D005204 ORTHO05D006037 1.1e-11 76.3 166 30.1
Zm00001eb009560 Zea mays HOM05D005204 ORTHO05D006037 1.2e-10 72.8 134 39.6
Zm00001eb046380 Zea mays HOM05D005204 ORTHO05D006037 1.2e-10 72.8 134 39.6
Zm00001eb219840 Zea mays HOM05D005204 ORTHO05D006037 1.2e-10 72.8 134 39.6
Zm00001eb139230 Zea mays HOM05D005204 ORTHO05D006037 1.0e-09 69.7 133 36.8
Zm00001eb139240 Zea mays HOM05D001287 ORTHO05D006037 6.5e-09 67.0 59 52.5
ATR0296G001 Amborella trichopoda HOM05D005204 ORTHO05D006037 2.5e-08 65.1 87 50.6


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