Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 0.0e+00 1309.3 652 100.0
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 1.4e-295 1019.2 669 78.3
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 1.6e-280 969.1 675 75.0
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 3.8e-269 931.4 675 71.7
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 9.6e-265 916.8 687 70.2
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 2.2e-253 879.0 662 67.7
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 2.5e-252 875.5 665 67.5
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 1.1e-249 866.7 656 67.2
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 2.7e-243 845.5 667 65.7
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 3.6e-243 845.1 664 64.6
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 1.7e-240 836.3 661 65.4
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 2.8e-240 835.5 664 64.6
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 2.6e-238 828.9 667 64.6
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 7.7e-238 827.4 665 66.5
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 2.9e-237 825.5 671 65.9
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 8.5e-237 823.9 664 63.7
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.1e-236 823.5 623 67.4
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 8.8e-234 813.9 721 61.3
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.1e-231 807.0 671 62.7
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 2.2e-229 799.3 671 62.4
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 2.2e-229 799.3 661 62.5
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 3.8e-229 798.5 672 61.9
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 6.5e-229 797.7 668 62.6
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 2.5e-228 795.8 671 62.1
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 3.0e-226 788.9 672 62.2
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 6.7e-226 787.7 671 61.1
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 1.7e-224 783.1 666 59.8
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 4.8e-224 781.6 666 61.9
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 1.1e-223 780.4 660 60.0
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 1.4e-223 780.0 672 62.2
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 1.8e-223 779.6 654 60.9
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 5.3e-223 778.1 650 62.9
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 4.5e-222 775.0 665 61.1
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 6.5e-221 771.2 672 61.6
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 5.5e-220 768.1 677 61.0
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 5.5e-220 768.1 667 60.3
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 9.4e-220 767.3 665 60.9
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 2.7e-219 765.8 671 59.6
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 4.7e-219 765.0 670 60.4
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 6.8e-218 761.1 680 60.0
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 8.8e-218 760.8 668 58.7
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 8.8e-218 760.8 675 60.3
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 2.0e-217 759.6 673 59.3
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 2.0e-217 759.6 650 62.3
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 9.8e-217 757.3 674 59.2
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 2.2e-216 756.1 659 60.5
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 4.8e-216 755.0 656 60.7
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 1.8e-215 753.1 654 58.9
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 1.7e-213 746.5 648 59.4
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 3.8e-213 745.3 699 55.2
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 8.5e-213 744.2 661 59.8
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 1.9e-212 743.0 654 58.6
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 1.9e-212 743.0 654 58.6
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 4.2e-212 741.9 654 58.1
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.2e-211 740.3 659 58.1
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 6.8e-210 734.6 657 58.1
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.2e-209 733.8 748 51.7
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 4.4e-209 731.9 654 58.0
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 9.8e-209 730.7 659 56.6
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 1.7e-208 729.9 675 57.6
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 1.8e-207 726.5 666 57.4
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 3.1e-207 725.7 670 57.0
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 7.7e-206 721.1 664 59.2
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 3.0e-202 709.1 709 55.1
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 2.0e-201 706.4 656 56.9
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 9.8e-201 704.1 676 54.7
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 6.4e-200 701.4 520 69.6
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 8.3e-200 701.0 676 54.9
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 9.2e-199 697.6 673 54.4
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 2.7e-198 696.0 679 55.2
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 7.8e-198 694.5 657 56.2
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 1.3e-197 693.7 664 57.7
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 5.0e-197 691.8 670 55.2
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 6.6e-197 691.4 679 53.6
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 1.4e-194 683.7 686 53.6
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 1.2e-193 680.6 680 54.4
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 2.6e-193 679.5 680 54.6
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 1.1e-191 674.1 675 56.4
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 1.1e-191 674.1 677 53.8
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 1.1e-191 674.1 678 54.1
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 5.4e-191 671.8 678 53.8
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 9.2e-191 671.0 535 66.5
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 6.0e-190 668.3 655 55.3
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 3.3e-188 662.5 666 52.9
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 8.3e-184 647.9 653 53.9
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 2.5e-180 636.3 474 68.1
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.2e-174 617.5 510 62.4
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 1.6e-171 607.1 666 52.3
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 2.2e-168 596.7 646 50.2
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 5.1e-165 585.5 650 50.5
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 4.8e-163 578.9 520 61.0
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 1.5e-161 573.9 526 59.7
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 3.2e-151 539.7 682 46.3
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 1.3e-144 517.7 642 46.3
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 1.7e-136 490.7 654 44.5
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 1.8e-122 444.1 400 59.2
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 4.4e-116 422.9 399 60.9
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 5.7e-108 396.0 652 36.8
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 2.3e-101 374.0 627 36.8
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 1.8e-82 311.2 253 62.8
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 7.8e-73 279.3 468 38.0
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.1e-63 248.8 536 33.0
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 1.3e-59 235.3 488 36.3
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.9e-42 178.3 230 42.6
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.4e-39 166.4 177 48.0
Hma1.2p1_0078F.1_g039980 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 9.6e-39 166.0 132 61.4
AUR62038912 Chenopodium quinoa HOM05D006559 ORTHO05D008867 6.9e-37 159.8 221 38.9
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 1.3e-32 145.6 108 69.4
MBI14_g17950_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D241410 2.6e-28 131.3 147 49.7
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 1.0e-27 129.4 379 28.8
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 1.7e-27 128.6 93 64.5
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 9.7e-23 112.8 97 57.7
Lj6A690T73 Lonicera japonica HOM05D006559 ORTHO05D008867 3.1e-21 107.8 79 60.8
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 7.6e-20 103.2 79 64.6
RcHm_v2.0_Chr3g0458131 Rosa chinensis HOM05D006559 ORTHO05D050582 2.9e-19 101.3 76 71.1
BcaB04g20870 Brassica carinata HOM05D006559 ORTHO05D019951 1.3e-16 92.4 86 58.1
RcHm_v2.0_Chr4g0425071 Rosa chinensis HOM05D006559 ORTHO05D343184 2.3e-16 91.7 70 65.7
BcaC01g05501 Brassica carinata HOM05D006559 ORTHO05D019951 9.7e-15 86.3 89 56.2
Potri.008G105850 Populus trichocarpa HOM05D006559 ORTHO05D050582 9.4e-10 69.7 72 51.4


User provided reference genes

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