Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 1.4e-36 157.1 207 100.0
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 5.4e-20 102.1 163 85.3
FAN07G0737 Fragaria x ananassa HOM05D008359 ORTHO05D010300 1.2e-14 84.3 165 81.8
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 1.2e-14 84.3 163 76.7
FvH4_4g20460 Fragaria vesca HOM05D008359 ORTHO05D010300 7.6e-14 81.6 166 80.1
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 5.4e-12 75.5 89 92.1
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 2.1e-11 73.6 163 78.5
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 4.6e-11 72.4 89 85.4
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 6.0e-11 72.0 89 84.3
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 1.0e-10 71.2 89 82.0
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 5.1e-10 68.9 89 87.6
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 5.1e-10 68.9 89 82.0
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 5.1e-10 68.9 89 82.0
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 1.5e-09 67.4 89 84.3
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 4.3e-09 65.9 89 83.1
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 9.6e-09 64.7 90 84.4
RcHm_v2.0_Chr4g0425941 Rosa chinensis HOM05D008359 ORTHO05D010300 9.6e-09 64.7 33 97.0
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 2.8e-08 63.2 35 82.9
FAN04G0049 Fragaria x ananassa HOM05D024256 ORTHO05D010300 8.1e-08 61.6 32 93.8
Migut.N00029 Erythranthe guttata HOM05D008359 ORTHO05D010300 1.1e-07 61.2 51 82.4
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 1.8e-07 60.5 31 90.3
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 1.8e-07 60.5 32 87.5
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 1.8e-07 60.5 32 87.5
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 2.4e-07 60.1 30 93.3
PGR031G3777 Punica granatum HOM05D008359 ORTHO05D010300 3.1e-07 59.7 35 82.9
Nitab4.5_0000289g0010 Nicotiana tabacum HOM05D008359 ORTHO05D010300 4.0e-07 59.3 32 87.5
Nn3g21784 Nelumbo nucifera HOM05D008359 ORTHO05D010300 5.3e-07 58.9 95 82.1
QL06p012880 Quercus lobata HOM05D008359 ORTHO05D010300 5.3e-07 58.9 160 72.5
THA.LOC104820317 Tarenaya hassleriana HOM05D008359 ORTHO05D010300 5.3e-07 58.9 82 75.6
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 6.9e-07 58.5 159 71.7
FAN11G0909 Fragaria x ananassa HOM05D008359 ORTHO05D010300 6.9e-07 58.5 32 90.6
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 1.2e-06 57.8 34 79.4
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 1.5e-06 57.4 91 81.3
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 1.5e-06 57.4 28 96.4
Nitab4.5_0004298g0050 Nicotiana tabacum HOM05D008359 ORTHO05D010300 1.5e-06 57.4 31 87.1
CSS0020578 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 2.0e-06 57.0 87 82.8
Thecc.04G305300 Theobroma cacao HOM05D008359 ORTHO05D010300 2.0e-06 57.0 73 90.4
HanXRQChr01g0022331 Helianthus annuus HOM05D008359 ORTHO05D010300 2.6e-06 56.6 33 84.8
MBI19_g03271_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 2.6e-06 56.6 36 83.3
Oeu044729.1 Olea europaea HOM05D008359 ORTHO05D010300 2.6e-06 56.6 32 84.4
Atru.chr4.3060 Acer truncatum HOM05D008359 ORTHO05D010300 3.4e-06 56.2 87 77.0
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 3.4e-06 56.2 31 83.9
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 3.4e-06 56.2 51 74.5
C06p02350 Brassica napus HOM05D008359 ORTHO05D010300 4.4e-06 55.8 35 77.1
CARHR092430 Cardamine hirsuta HOM05D014329 ORTHO05D014763 5.8e-06 55.5 89 65.2
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 5.8e-06 55.5 30 86.7
ECA246G4255 Erigeron canadensis HOM05D008359 ORTHO05D010300 7.6e-06 55.1 33 81.8
TAR362G0881 Trochodendron aralioides HOM05D008359 ORTHO05D010300 9.9e-06 54.7 92 80.4


User provided reference genes

Program Settings