Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G108500 Prunus persica HOM05D004301 ORTHO05D005124 3.4e-50 201.8 139 100.0
RcHm_v2.0_Chr4g0426811 Rosa chinensis HOM05D004301 ORTHO05D005124 1.0e-38 163.7 131 75.6
FvH4_4g21200 Fragaria vesca HOM05D004301 ORTHO05D005124 2.3e-38 162.5 131 78.6
FAN12G2174 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.0e-38 162.2 131 71.0
FAN07G2330 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.9e-38 161.8 131 71.8
Lj1A1229G41 Lonicera japonica HOM05D004301 ORTHO05D005124 1.1e-35 153.7 131 65.6
Oeu033197.1 Olea europaea HOM05D004301 ORTHO05D005124 4.0e-35 151.8 131 64.9
Duzib235G0809 Durio zibethinus HOM05D004301 ORTHO05D005124 5.2e-35 151.4 131 65.6
Dinv18010 Davidia involucrata HOM05D004301 ORTHO05D005124 6.8e-35 151.0 131 64.9
Cc00_g00410 Coffea canephora HOM05D004301 ORTHO05D005124 8.9e-35 150.6 131 65.6
Gohir.A06G147900 Gossypium hirsutum HOM05D004301 ORTHO05D005124 8.9e-35 150.6 131 65.6
Manes.03G210700 Manihot esculenta HOM05D004301 ORTHO05D005124 8.9e-35 150.6 131 64.1
MSTRG.7223 Avicennia marina HOM05D004301 ORTHO05D005124 1.2e-34 150.2 131 63.4
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 1.2e-34 150.2 131 64.9
Ciclev10017125m.g Citrus clementina HOM05D004301 ORTHO05D005124 1.2e-34 150.2 131 64.9
Cpa.g.sc198.42 Carica papaya HOM05D004301 ORTHO05D005124 1.5e-34 149.8 131 64.1
Nn7g37600 Nelumbo nucifera HOM05D004301 ORTHO05D005124 1.5e-34 149.8 131 64.9
Rhsim13G0155100 Rhododendron simsii HOM05D004301 ORTHO05D005124 1.5e-34 149.8 131 65.6
CSS0003131 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 2.0e-34 149.4 131 64.9
CSS0040354 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 2.0e-34 149.4 131 64.9
MELO3C014729.2 Cucumis melo HOM05D004301 ORTHO05D005124 2.0e-34 149.4 131 64.9
CsaV3_4G017560 Cucumis sativus L. HOM05D004301 ORTHO05D005124 2.0e-34 149.4 131 64.9
Gohir.D06G153800 Gossypium hirsutum HOM05D004301 ORTHO05D005124 2.6e-34 149.1 131 64.9
Gorai.010G179800 Gossypium raimondii HOM05D004301 ORTHO05D005124 2.6e-34 149.1 131 64.9
Nitab4.5_0007007g0030 Nicotiana tabacum HOM05D004301 ORTHO05D005124 3.4e-34 148.7 131 64.9
vmacro03693 Vaccinium macrocarpon HOM05D004301 ORTHO05D005124 3.4e-34 148.7 131 64.9
Atru.chr10.2203 Acer truncatum HOM05D004301 ORTHO05D005124 4.4e-34 148.3 131 64.1
Migut.M01306 Erythranthe guttata HOM05D004301 ORTHO05D005124 4.4e-34 148.3 131 62.6
Lj2g0004276 Lotus japonicus HOM05D004301 ORTHO05D005124 4.4e-34 148.3 131 64.1
Peaxi162Scf00595g00039 Petunia axillaris HOM05D004301 ORTHO05D005124 4.4e-34 148.3 131 64.1
Lsat_1_v5_gn_1_128621 Lactuca sativa HOM05D004301 ORTHO05D005124 7.5e-34 147.5 138 71.0
SGA_v2.0_scaffold4G01921 Striga asiatica HOM05D004301 ORTHO05D005124 7.5e-34 147.5 131 61.8
Nitab4.5_0007482g0040 Nicotiana tabacum HOM05D004301 ORTHO05D005124 9.8e-34 147.1 131 64.1
Rhsim08G0082200 Rhododendron simsii HOM05D004301 ORTHO05D005124 9.8e-34 147.1 131 64.1
SalBow8G0640 Salvia bowleyana HOM05D004301 ORTHO05D005124 9.8e-34 147.1 131 61.1
PGSC0003DMG400016459 Solanum tuberosum HOM05D004301 ORTHO05D005124 9.8e-34 147.1 131 64.1
CSS0019231 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 1.3e-33 146.7 131 64.1
HanXRQChr10g0285201 Helianthus annuus HOM05D004301 ORTHO05D005124 1.3e-33 146.7 134 79.9
Lj5g0024394 Lotus japonicus HOM05D004301 ORTHO05D005124 1.3e-33 146.7 131 63.4
Cfa000237 Carpinus fangiana HOM05D004301 ORTHO05D005124 1.7e-33 146.4 131 63.4
Haze_06785 Corylus avellana HOM05D004301 ORTHO05D005124 1.7e-33 146.4 131 63.4
Sc05g0009100 Simmondsia chinensis HOM05D004301 ORTHO05D005124 1.7e-33 146.4 131 61.8
THA.LOC104806300 Tarenaya hassleriana HOM05D004301 ORTHO05D005124 2.2e-33 146.0 131 63.4
Prupe.4G022700 Prunus persica HOM05D004301 ORTHO05D005124 2.9e-33 145.6 131 62.6
Sopen02g025120 Solanum pennellii HOM05D004301 ORTHO05D005124 2.9e-33 145.6 131 63.4
Thecc.06G088100 Theobroma cacao HOM05D004301 ORTHO05D005124 2.9e-33 145.6 131 63.4
TAR626G0955 Trochodendron aralioides HOM05D004301 ORTHO05D005124 3.7e-33 145.2 131 61.8
ATR0752G175 Amborella trichopoda HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 63.4
arahy.Tifrunner.gnm1.ann1.0XE69C Arachis hypogaea HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 62.6
arahy.Tifrunner.gnm1.ann1.210EWG Arachis hypogaea HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 62.6
arahy.Tifrunner.gnm1.ann1.6J361A Arachis hypogaea HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 62.6
arahy.Tifrunner.gnm1.ann1.RW8N71 Arachis hypogaea HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 62.6
Solyc02g080430.3 Solanum lycopersicum HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 63.4
TWI63G1781 Tripterygium wilfordii HOM05D004301 ORTHO05D005124 4.9e-33 144.8 131 64.1
ECA248G0561 Erigeron canadensis HOM05D004301 ORTHO05D005124 6.4e-33 144.4 131 61.8
Manes.09G000400 Manihot esculenta HOM05D004301 ORTHO05D005124 6.4e-33 144.4 131 61.8
Psat3g175280 Pisum sativum HOM05D004301 ORTHO05D005124 6.4e-33 144.4 131 61.1
BcaB01g01837 Brassica carinata HOM05D004301 ORTHO05D005124 8.3e-33 144.1 131 61.8
Cc03_g13960 Coffea canephora HOM05D004301 ORTHO05D005124 8.3e-33 144.1 131 63.4
PGR004G0513 Punica granatum HOM05D004301 ORTHO05D005124 8.3e-33 144.1 131 66.4
PSO339G4464 Papaver somniferum HOM05D004301 ORTHO05D005124 1.1e-32 143.7 131 61.8
PSO384G5030 Papaver somniferum HOM05D004301 ORTHO05D005124 1.1e-32 143.7 131 61.8
Phvul.007G037700 Phaseolus vulgaris HOM05D004301 ORTHO05D005124 1.1e-32 143.7 131 61.8
TPR.G23756 Trifolium pratense HOM05D004301 ORTHO05D005124 1.1e-32 143.7 131 61.8
CAN.G1175.8 Capsicum annuum HOM05D004301 ORTHO05D005124 1.9e-32 142.9 131 62.6
AL6G48270 Arabidopsis lyrata HOM05D004301 ORTHO05D005124 2.4e-32 142.5 131 62.6
COL.COLO4_28865 Corchorus olitorius HOM05D004301 ORTHO05D005124 2.4e-32 142.5 131 61.8
THA.LOC104813057 Tarenaya hassleriana HOM05D004301 ORTHO05D005124 2.4e-32 142.5 131 61.8
Aqoxy3G02575 Aquilegia oxysepala HOM05D004301 ORTHO05D005124 3.2e-32 142.1 131 74.8
A09p26100 Brassica napus HOM05D004301 ORTHO05D005124 3.2e-32 142.1 131 70.2
BraA09t38177Z Brassica rapa HOM05D004301 ORTHO05D005124 3.2e-32 142.1 131 70.2
Ca_26119_v3 Cicer arietinum L. HOM05D004301 ORTHO05D005124 3.2e-32 142.1 131 61.1
TAR629G3276 Trochodendron aralioides HOM05D004301 ORTHO05D005124 4.1e-32 141.7 131 61.1
Glyma.10G264300 Glycine max HOM05D004301 ORTHO05D005124 5.4e-32 141.4 131 60.3
Carub.0006s3270 Capsella rubella HOM05D004301 ORTHO05D005124 7.1e-32 141.0 131 61.1
Sp6g04160 Schrenkiella parvula HOM05D004301 ORTHO05D005124 7.1e-32 141.0 131 59.5
BcaC04g21325 Brassica carinata HOM05D004301 ORTHO05D005124 1.2e-31 140.2 131 79.4
C09p33120 Brassica napus HOM05D004301 ORTHO05D005124 1.2e-31 140.2 131 79.4
Hund21400 Selenicereus undatus HOM05D004301 ORTHO05D005124 1.2e-31 140.2 131 60.3
BolC9t56147H Brassica oleracea HOM05D004301 ORTHO05D005124 1.6e-31 139.8 131 77.1
CARHR252750 Cardamine hirsuta HOM05D004301 ORTHO05D005124 1.6e-31 139.8 131 61.1
Medtr7g037020 Medicago truncatula HOM05D004301 ORTHO05D005124 1.6e-31 139.8 131 60.3
RcHm_v2.0_Chr5g0030661 Rosa chinensis HOM05D004301 ORTHO05D005124 1.6e-31 139.8 131 59.5
AT4G04780 Arabidopsis thaliana HOM05D004301 ORTHO05D005124 3.5e-31 138.7 131 61.1
CANSAT56G0804 Cannabis sativa HOM05D004301 ORTHO05D005124 3.5e-31 138.7 131 60.3
CiPaw.09G090400 Carya illinoinensis HOM05D004301 ORTHO05D005124 3.5e-31 138.7 131 60.3
Aa31LG9G9690 Aethionema arabicum HOM05D004301 ORTHO05D005124 4.6e-31 138.3 131 67.2
Potri.004G017100 Populus trichocarpa HOM05D004301 ORTHO05D005124 4.6e-31 138.3 131 61.8
Sabra04G0009400 Salix brachista HOM05D004301 ORTHO05D005124 6.0e-31 137.9 131 61.8
VMungo0720G3170 Vigna mungo HOM05D004301 ORTHO05D005124 6.0e-31 137.9 131 59.5
DCAR_008141 Daucus carota HOM05D004301 ORTHO05D005124 7.8e-31 137.5 131 60.3
QL05p073536 Quercus lobata HOM05D004301 ORTHO05D005124 7.8e-31 137.5 131 59.5
PSO017G1667 Papaver somniferum HOM05D004301 ORTHO05D005124 1.0e-30 137.1 131 58.8
unitig_32.g11531 Utricularia gibba HOM05D004301 ORTHO05D005124 1.3e-30 136.7 131 60.3
Oeu037360.1 Olea europaea HOM05D004301 ORTHO05D005124 1.7e-30 136.3 132 59.1
QL05p073775 Quercus lobata HOM05D004301 ORTHO05D005124 1.7e-30 136.3 131 58.8
RcHm_v2.0_Chr5g0030681 Rosa chinensis HOM05D004301 ORTHO05D005124 3.0e-30 135.6 131 58.8
FvH4_3g18180 Fragaria vesca HOM05D004301 ORTHO05D005124 3.9e-30 135.2 131 58.0
FAN16G3380 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.9e-30 135.2 131 58.0
MD10G1319700 Malus domestica HOM05D004301 ORTHO05D005124 6.6e-30 134.4 123 61.0
unitig_748.g7577 Utricularia gibba HOM05D004301 ORTHO05D005124 1.5e-29 133.3 131 58.0
Lalb_Chr17g0338691 Lupinus albus HOM05D004301 ORTHO05D005124 2.5e-29 132.5 131 58.0
PSO170G5652 Papaver somniferum HOM05D004301 ORTHO05D005124 2.5e-29 132.5 131 58.0
Ah.09g234990 Amaranthus hybridus HOM05D004301 ORTHO05D005124 5.6e-29 131.3 152 68.4
HPP92_021475 Vanilla planifolia HOM05D004301 ORTHO05D005124 7.3e-29 131.0 131 58.8
EL10Ac8g20032 Beta vulgaris HOM05D004301 ORTHO05D005124 9.5e-29 130.6 144 63.2
Duzib192G0451 Durio zibethinus HOM05D004301 ORTHO05D005124 1.2e-28 130.2 131 58.0
FAN25G1723 Fragaria x ananassa HOM05D004301 ORTHO05D005124 1.2e-28 130.2 131 56.5
C02p40060 Brassica napus HOM05D004301 ORTHO05D005124 3.6e-28 128.6 131 57.3
MBI16_g31789_MAGBIO Magnolia biondii HOM05D004301 ORTHO05D005124 6.2e-28 127.9 145 53.8
Cc00_g35050 Coffea canephora HOM05D004301 ORTHO05D005124 8.1e-28 127.5 128 58.6
FAN20G0317 Fragaria x ananassa HOM05D004301 ORTHO05D005124 8.1e-28 127.5 131 56.5
BraA02t07511Z Brassica rapa HOM05D004301 ORTHO05D005124 1.4e-27 126.7 131 57.3
CDE05G1190 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 3.1e-27 125.6 131 55.7
AUR62012686 Chenopodium quinoa HOM05D004301 ORTHO05D005124 3.1e-27 125.6 131 56.5
SEGI_29072 Sequoiadendron giganteum HOM05D004301 ORTHO05D005124 6.8e-27 124.4 133 55.6
Oeu033198.1 Olea europaea HOM05D004301 ORTHO05D005124 8.9e-27 124.0 114 61.4
CDE04G1315 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 3.4e-26 122.1 131 54.2
BcaC03g16234 Brassica carinata HOM05D004301 ORTHO05D005124 9.9e-26 120.6 127 55.1
PSO478G1674 Papaver somniferum HOM05D004301 ORTHO05D005124 6.4e-25 117.9 131 55.7
AagrBONN_evm.TU.Sc2ySwM_362.2472 Anthoceros agrestis HOM05D004301 ORTHO05D005124 7.1e-24 114.4 131 50.4
SEGI_24906 Sequoiadendron giganteum HOM05D004301 ORTHO05D005124 2.7e-23 112.5 163 45.4
Mapoly0013s0130 Marchantia polymorpha HOM05D004301 ORTHO05D005124 1.0e-22 110.5 131 45.8
A02p25250 Brassica napus HOM05D004301 ORTHO05D005124 3.9e-22 108.6 116 55.2
BolC2t10033H Brassica oleracea HOM05D004301 ORTHO05D005124 1.9e-21 106.3 114 55.3
BcaC03g16233 Brassica carinata HOM05D004301 ORTHO05D005124 3.3e-21 105.5 133 49.6
SMO200G0228 Selaginella moellendorffii HOM05D004301 ORTHO05D005124 3.3e-21 105.5 132 56.8
CDE05G0994 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 5.6e-21 104.8 120 51.7
Pp3c1_16690 Physcomitrium patens HOM05D004301 ORTHO05D005124 2.1e-20 102.8 131 45.8
Psat5g160160 Pisum sativum HOM05D004301 ORTHO05D005124 2.4e-19 99.4 103 55.3
Psat5g160080 Pisum sativum HOM05D004301 ORTHO05D005124 1.2e-18 97.1 103 54.4
Zm00001eb173130 Zea mays HOM05D004301 ORTHO05D005124 1.5e-18 96.7 141 59.6
CBR_g6572 Chara braunii HOM05D004301 ORTHO05D005124 1.3e-17 93.6 130 46.9
Gorai.005G123500 Gossypium raimondii HOM05D004301 ORTHO05D005124 9.3e-16 87.4 56 83.9
Gohir.D10G075550 Gossypium hirsutum HOM05D004301 ORTHO05D005124 1.2e-15 87.0 55 85.5
Gohir.D02G172033 Gossypium hirsutum HOM05D004301 ORTHO05D005124 7.8e-15 84.3 55 81.8
Gorai.006G117000 Gossypium raimondii HOM05D004301 ORTHO05D005124 7.8e-15 84.3 55 81.8
RcHm_v2.0_Chr4g0426791 Rosa chinensis HOM05D004301 ORTHO05D005124 1.7e-14 83.2 88 56.8
Gohir.D09G045050 Gossypium hirsutum HOM05D004301 ORTHO05D005124 5.1e-14 81.6 55 78.2
Nitab4.5_0003254g0080 Nicotiana tabacum HOM05D004301 ORTHO05D005124 5.1e-14 81.6 54 81.5
AUR62021971 Chenopodium quinoa HOM05D004301 ORTHO05D005124 1.1e-11 73.9 45 82.2
Eucgr.G02030 Eucalyptus grandis HOM05D004301 ORTHO05D005124 6.9e-11 71.2 43 86.0
FAN21G3317 Fragaria x ananassa HOM05D004301 ORTHO05D005124 1.2e-10 70.5 88 47.7
Medtr1g107580 Medicago truncatula HOM05D004301 ORTHO05D005124 2.6e-10 69.3 88 45.5
Nitab4.5_0003254g0090 Nicotiana tabacum HOM05D004301 ORTHO05D005124 2.6e-10 69.3 40 80.0
Actinidia26923 Actinidia chinensis HOM05D004301 ORTHO05D005124 2.9e-09 65.9 130 40.0
BcaB05g23708 Brassica carinata HOM05D004301 ORTHO05D005124 6.4e-09 64.7 125 37.6
A05p31460 Brassica napus HOM05D004301 ORTHO05D005124 2.4e-08 62.8 85 43.5
BraA05t21985Z Brassica rapa HOM05D004301 ORTHO05D005124 2.4e-08 62.8 85 43.5
CAN.G138.7 Capsicum annuum HOM05D004301 ORTHO05D005124 3.2e-08 62.4 99 41.4
C05p45830 Brassica napus HOM05D004301 ORTHO05D005124 5.4e-08 61.6 44 68.2
C05p45820 Brassica napus HOM05D004301 ORTHO05D005124 1.2e-07 60.5 46 63.0
BolC5t33302H Brassica oleracea HOM05D004301 ORTHO05D005124 2.1e-07 59.7 46 63.0
SGA_v2.0_scaffold14G06848 Striga asiatica HOM05D004301 ORTHO05D005124 3.5e-07 58.9 40 65.0
MCO03G202 Micromonas commoda HOM05D004301 ORTHO05D005124 4.6e-07 58.5 136 30.9
MD13G1144100 Malus domestica HOM05D004301 ORTHO05D000131 8.7e-06 54.3 31 90.3


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