Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 3.4e-86 321.6 162 100.0
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.3e-69 266.5 162 82.7
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 7.6e-62 240.7 160 75.6
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 5.5e-60 234.6 160 75.0
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 2.1e-59 232.6 160 74.4
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 8.2e-56 220.7 161 69.6
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.0e-54 216.1 185 63.8
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 6.5e-53 211.1 165 67.9
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.6e-51 206.5 160 68.8
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 3.5e-51 205.3 156 64.7
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 3.5e-51 205.3 156 64.7
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 6.1e-51 204.5 149 69.1
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 7.9e-51 204.1 162 65.4
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 2.3e-50 202.6 159 67.3
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 6.7e-50 201.1 123 79.7
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 6.7e-50 201.1 123 79.7
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 5.7e-49 198.0 143 67.8
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 7.4e-49 197.6 121 76.0
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 7.4e-49 197.6 153 65.4
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 9.7e-49 197.2 128 74.2
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.3e-48 196.8 159 65.4
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 3.7e-48 195.3 172 60.5
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 3.7e-48 195.3 144 70.1
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 8.2e-48 194.1 147 66.0
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.4e-47 193.4 134 70.9
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.4e-47 193.4 128 71.9
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.4e-47 193.4 127 72.4
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 1.4e-47 193.4 149 65.8
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.8e-47 193.0 116 80.2
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 3.1e-47 192.2 146 65.8
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 5.3e-47 191.4 123 73.2
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.5e-46 189.9 131 71.8
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 1.5e-46 189.9 131 71.8
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 2.0e-46 189.5 155 59.4
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 2.6e-46 189.1 146 65.1
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.6e-46 189.1 121 75.2
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 7.7e-46 187.6 165 61.8
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.3e-45 186.8 128 74.2
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.3e-45 186.8 178 56.2
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 1.7e-45 186.4 139 64.7
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.2e-45 186.0 123 71.5
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 3.8e-45 185.3 118 72.9
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 5.0e-45 184.9 119 73.1
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 5.0e-45 184.9 130 66.2
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 6.5e-45 184.5 127 70.1
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 6.5e-45 184.5 127 70.1
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 6.5e-45 184.5 155 59.4
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 8.5e-45 184.1 118 72.9
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.1e-44 183.7 120 73.3
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 1.1e-44 183.7 141 67.4
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 1.9e-44 183.0 123 69.9
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.2e-44 181.8 120 70.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 5.5e-44 181.4 123 70.7
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 5.5e-44 181.4 121 71.1
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.5e-44 181.4 119 73.1
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 5.5e-44 181.4 173 59.5
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 7.2e-44 181.0 125 68.8
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.2e-43 180.3 120 70.8
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 1.2e-43 180.3 155 58.7
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.6e-43 179.9 119 72.3
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 2.1e-43 179.5 115 73.0
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.6e-43 178.7 120 70.0
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 4.6e-43 178.3 161 55.9
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 6.1e-43 177.9 156 62.2
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.0e-42 177.2 117 69.2
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.8e-42 176.4 118 70.3
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.8e-42 176.4 118 70.3
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.8e-42 176.4 116 70.7
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.3e-42 176.0 118 69.5
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 2.3e-42 176.0 120 68.3
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 3.0e-42 175.6 118 70.3
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.0e-42 175.6 139 61.9
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 5.1e-42 174.9 118 68.6
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 5.1e-42 174.9 118 68.6
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.1e-41 173.7 128 64.8
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 1.1e-41 173.7 121 69.4
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 2.5e-41 172.6 126 65.9
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 2.5e-41 172.6 105 79.0
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 4.3e-41 171.8 121 68.6
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 4.3e-41 171.8 165 58.8
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.3e-41 171.8 121 66.9
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 9.7e-41 170.6 130 63.8
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 1.3e-40 170.2 132 62.1
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.7e-40 169.9 154 55.2
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 4.8e-40 168.3 165 58.2
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 1.1e-39 167.2 116 69.8
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.4e-39 166.8 127 65.4
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 9.1e-39 164.1 126 61.9
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 2.0e-38 162.9 133 61.7
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.0e-37 160.6 161 57.8
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 2.1e-35 152.9 138 55.8
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 3.9e-34 148.7 90 80.0
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 1.1e-33 147.1 96 71.9
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 2.0e-33 146.4 100 69.0
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.3e-32 143.7 104 66.3
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 2.2e-32 142.9 139 55.4
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 3.1e-31 139.0 120 51.7
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 2.6e-30 136.0 131 57.3
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 2.9e-29 132.5 117 51.3
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 6.5e-29 131.3 87 71.3
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 8.5e-29 131.0 148 49.3
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.5e-28 129.4 104 63.5
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 2.5e-28 129.4 74 83.8
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.5e-25 120.2 74 82.4
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 2.0e-25 119.8 119 52.1
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 7.0e-23 111.3 76 78.9
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 4.5e-22 108.6 80 61.2
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.6e-19 100.1 69 73.9
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 3.4e-17 92.4 53 83.0
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 7.5e-17 91.3 57 71.9
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.1e-15 87.4 100 53.0
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 2.0e-14 83.2 78 56.4
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 5.0e-13 78.6 51 62.7
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 4.7e-11 72.0 59 50.8
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 2.3e-10 69.7 141 30.5
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 4.9e-08 62.0 76 47.4
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 2.0e-06 56.6 59 54.2
CSS0022350 Camellia sinensis var. sinensis HOM05D025454 ORTHO05D024692 7.7e-06 54.7 34 67.6


User provided reference genes

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