Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 6.8e-194 680.6 380 100.0
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.2e-134 483.8 384 73.2
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.8e-125 453.4 384 71.6
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.0e-101 374.4 386 65.5
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.3e-91 340.9 383 61.6
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.4e-90 337.4 382 60.5
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.3e-84 316.2 382 58.6
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 6.3e-75 285.4 386 48.7
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 2.7e-73 280.0 400 46.8
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.8e-69 267.3 399 47.6
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.4e-58 230.3 400 43.8
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 9.2e-58 228.4 404 44.8
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.7e-56 224.2 406 45.3
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.9e-55 220.7 396 46.7
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 9.5e-55 218.4 309 46.3
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.8e-53 214.2 374 42.2
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 6.8e-53 212.2 348 43.4
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-52 211.1 393 45.5
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.5e-52 211.1 423 38.1
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 9.8e-52 208.4 395 41.3
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.3e-51 208.0 381 44.4
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 8.3e-51 205.3 282 47.5
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.9e-50 204.1 401 43.1
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.4e-50 203.8 388 46.6
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 9.2e-50 201.8 423 41.4
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.1e-49 200.7 386 43.0
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.5e-47 194.5 381 41.5
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.5e-47 194.5 384 40.9
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 1.9e-47 194.1 253 47.8
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 2.1e-46 190.7 399 39.6
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 4.7e-46 189.5 392 41.6
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 6.2e-46 189.1 426 41.1
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 8.1e-46 188.7 393 41.2
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.8e-45 187.6 378 45.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 3.1e-45 186.8 382 39.0
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 5.2e-45 186.0 382 40.3
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 5.2e-45 186.0 384 39.3
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 5.2e-45 186.0 382 40.3
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 5.2e-45 186.0 390 41.8
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 5.2e-45 186.0 389 43.2
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-44 184.5 409 42.1
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 3.4e-44 183.3 390 40.0
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 2.2e-43 180.6 390 42.6
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.9e-43 180.3 394 42.1
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 4.9e-43 179.5 388 41.2
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 8.3e-43 178.7 386 38.6
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.1e-42 178.3 411 38.4
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.4e-42 177.9 388 43.6
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.4e-42 177.2 362 43.9
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 3.2e-42 176.8 403 37.5
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 5.4e-42 176.0 386 43.8
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.2e-41 174.9 406 42.4
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 3.5e-41 173.3 389 42.7
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.7e-40 171.0 401 38.4
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.7e-40 171.0 403 38.7
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 3.0e-40 170.2 353 38.0
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 8.6e-40 168.7 397 40.6
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 8.6e-40 168.7 388 35.3
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.5e-39 167.2 371 41.5
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 2.5e-39 167.2 360 39.7
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 2.5e-39 167.2 427 37.0
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 4.3e-39 166.4 431 36.4
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 7.3e-39 165.6 384 39.8
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 1.6e-38 164.5 383 39.9
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 2.8e-38 163.7 404 35.1
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 3.6e-38 163.3 366 38.0
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 4.7e-38 162.9 393 38.9
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.7e-38 162.9 378 36.8
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 6.2e-38 162.5 379 39.3
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 6.2e-38 162.5 395 38.5
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 6.2e-38 162.5 385 42.3
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.1e-37 160.2 371 40.7
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 5.2e-37 159.5 387 37.7
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 5.2e-37 159.5 376 38.8
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 8.9e-37 158.7 393 38.7
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.2e-36 158.3 388 38.7
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 2.0e-36 157.5 425 39.3
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 4.4e-36 156.4 412 33.5
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 7.6e-36 155.6 375 36.8
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.3e-35 154.8 340 44.4
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.4e-34 151.4 426 38.0
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 4.2e-34 149.8 425 37.9
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.2e-33 148.3 380 40.8
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 2.1e-33 147.5 332 41.6
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.7e-33 147.1 357 40.1
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.6e-33 146.4 363 37.2
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 4.6e-33 146.4 391 38.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 7.8e-33 145.6 363 37.2
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.0e-32 145.2 380 35.0
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.3e-32 144.8 291 43.3
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.5e-31 141.4 377 36.6
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 4.3e-31 139.8 383 38.6
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 4.3e-31 139.8 372 33.3
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 4.3e-31 139.8 405 33.8
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.3e-30 138.3 339 36.9
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 1.3e-30 138.3 385 34.0
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 1.6e-30 137.9 396 38.4
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 3.1e-29 133.7 312 34.9
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 5.8e-28 129.4 381 37.8
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 5.8e-28 129.4 390 36.4
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 2.9e-27 127.1 121 52.9
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 8.4e-27 125.6 388 38.1
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 8.4e-27 125.6 384 38.3
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.2e-26 123.6 101 58.4
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 3.2e-26 123.6 381 37.5
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.6e-25 119.8 139 56.1
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.3e-24 118.2 250 37.6
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.3e-24 118.2 334 32.3
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 6.2e-22 109.4 431 28.8
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.6e-20 104.0 100 55.0
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.7e-17 94.0 71 60.6
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 2.7e-17 94.0 135 43.0
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 4.6e-17 93.2 370 34.6
FAN12G0946 Fragaria x ananassa HOM05D005773 ORTHO05D046089 1.0e-16 92.0 167 45.5
FvH4_4g21660 Fragaria vesca HOM05D005773 ORTHO05D046089 3.0e-16 90.5 164 47.0
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 3.9e-16 90.1 86 54.7
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.5e-15 87.4 52 75.0
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 7.4e-15 85.9 427 28.6
TAR624G0439 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.9e-10 71.2 101 41.6
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.5e-10 70.9 48 60.4
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 7.1e-10 69.3 150 50.0
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 6.0e-09 66.2 341 31.7
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 5.1e-08 63.2 45 60.0
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 6.7e-08 62.8 337 31.2
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 9.6e-07 58.9 136 50.7
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 1.3e-06 58.5 98 34.7


User provided reference genes

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