Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 5.1e-76 287.7 153 100.0
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.9e-54 216.1 153 78.4
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.9e-54 216.1 153 79.1
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.9e-54 216.1 153 79.1
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.9e-54 216.1 158 79.1
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.9e-54 216.1 153 78.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 8.0e-53 210.7 153 77.8
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 5.2e-52 208.0 147 78.2
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.8e-47 191.8 156 74.4
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.8e-44 183.0 149 69.1
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 5.2e-44 181.4 150 68.0
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.7e-42 175.3 149 66.4
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 4.9e-42 174.9 154 67.5
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.4e-41 173.3 149 65.8
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.8e-41 172.9 149 65.8
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 2.4e-41 172.6 136 71.3
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 2.4e-41 172.6 151 66.2
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.1e-41 172.2 154 66.2
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 3.1e-41 172.2 149 66.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 4.1e-41 171.8 152 65.8
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 9.2e-41 170.6 155 65.8
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.6e-40 169.9 149 69.1
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 2.0e-40 169.5 151 65.6
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 2.0e-40 169.5 148 66.2
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 4.5e-40 168.3 151 64.9
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 7.7e-40 167.5 149 66.4
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.0e-39 167.2 125 75.2
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 2.3e-39 166.0 149 71.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 5.0e-39 164.9 153 62.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 8.6e-39 164.1 149 66.4
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 8.6e-39 164.1 138 73.9
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.1e-38 163.7 153 64.7
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.1e-38 163.7 153 64.1
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.1e-38 163.7 153 64.7
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 2.5e-38 162.5 153 63.4
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 7.3e-38 161.0 138 65.9
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 9.5e-38 160.6 129 73.6
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.2e-37 160.2 151 62.3
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 1.6e-37 159.8 129 70.5
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 2.8e-37 159.1 130 69.2
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.0e-36 157.1 149 62.4
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.4e-36 156.8 134 67.2
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.4e-36 156.8 149 62.4
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.3e-36 156.0 130 68.5
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 2.3e-36 156.0 138 68.1
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 3.0e-36 155.6 149 62.4
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 3.0e-36 155.6 149 62.4
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.0e-36 155.6 152 60.5
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 3.0e-36 155.6 160 60.6
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 4.0e-36 155.2 137 68.6
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 5.2e-36 154.8 123 70.7
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 8.9e-36 154.1 154 63.6
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 8.9e-36 154.1 149 62.4
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 8.9e-36 154.1 151 60.9
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 8.9e-36 154.1 151 60.3
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.2e-35 153.7 151 60.9
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.2e-35 153.7 151 60.9
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.2e-35 153.7 150 58.7
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.5e-35 153.3 151 62.9
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.5e-35 153.3 153 60.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 2.0e-35 152.9 160 59.4
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.4e-35 152.1 148 58.8
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.4e-35 151.8 112 72.3
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 7.5e-35 151.0 152 58.6
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 2.2e-34 149.4 112 74.1
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.9e-34 148.3 120 69.2
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 4.9e-34 148.3 126 67.5
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.9e-34 148.3 151 62.3
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.8e-33 146.4 109 73.4
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 4.1e-33 145.2 153 58.8
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 5.4e-33 144.8 125 65.6
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 5.4e-33 144.8 125 65.6
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.2e-32 143.7 151 58.9
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.6e-32 143.3 125 64.8
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 3.5e-32 142.1 151 61.6
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 7.8e-32 141.0 124 64.5
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.0e-31 140.6 110 72.7
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.0e-31 140.6 148 61.5
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.3e-31 140.2 123 65.0
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 5.0e-31 138.3 126 65.1
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 6.6e-31 137.9 153 61.4
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.1e-30 137.1 153 58.2
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.1e-30 137.1 135 63.0
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 3.3e-30 135.6 135 64.4
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 5.6e-30 134.8 150 59.3
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 9.5e-30 134.0 157 56.1
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 9.5e-30 134.0 128 64.8
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 9.5e-30 134.0 124 62.1
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 9.5e-30 134.0 157 54.8
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.1e-29 132.9 120 65.0
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 4.7e-29 131.7 152 57.9
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 6.2e-29 131.3 155 55.5
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 8.0e-29 131.0 152 55.3
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.4e-28 130.2 129 62.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.4e-28 130.2 105 70.5
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.8e-28 129.8 132 59.1
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 3.1e-28 129.0 127 61.4
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 3.1e-28 129.0 124 60.5
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 4.0e-28 128.6 124 60.5
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.2e-28 128.3 123 63.4
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 5.2e-28 128.3 124 59.7
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 9.8e-27 124.0 153 52.9
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 9.8e-27 124.0 155 56.8
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.3e-26 123.6 117 62.4
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.2e-26 122.9 70 91.4
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.7e-26 122.1 129 53.5
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 6.4e-26 121.3 70 90.0
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 8.3e-26 120.9 146 52.7
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 3.2e-25 119.0 152 52.0
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.6e-24 116.7 146 54.8
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 7.3e-22 107.8 219 39.7
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 6.8e-20 101.3 92 64.1
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 5.8e-19 98.2 127 54.3
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.3e-18 97.1 73 71.2
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 3.7e-18 95.5 79 62.0
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.9e-17 93.2 67 73.1
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.1e-16 89.7 122 45.9
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.7e-15 86.7 97 55.7
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.3e-14 82.4 109 47.7
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 3.4e-11 72.4 92 53.3
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 4.4e-11 72.0 74 59.5
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.9e-10 68.6 62 59.7
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 7.8e-08 61.2 49 65.3
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 5.1e-07 58.5 61 49.2
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 6.6e-07 58.2 48 70.8
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 8.6e-07 57.8 88 40.9
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 4.3e-06 55.5 82 41.5


User provided reference genes

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